| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4011 |
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| Symbol | metH |
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| ID | 6064566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4406412 |
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| End bp | 4410095 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603422 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001726937 |
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| Protein GI | 170021983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.960796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0169283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA AAGTGGAACA ACTGCGTGCG CAGTTAAATG AACGTATTCT GGTGCTGGAC
GGCGGTATGG GCACCATGAT CCAGAGCTAT CGACTGAACG AAGCCGATTT TCGTGGTGAA
CGCTTTGCCG ACTGGCCATG CGATCTCAAA GGCAACAACG ACCTGCTGGT GCTCAGCAAA
CCGGAAGTGA TCGCCGCTAT CCACAACGCC TACTTTGAAG CGGGCGCGGA TATCATCGAA
ACCAACACCT TCAACTCCAC GACCATTGCG ATGGCGGATT ACCAGATGGA ATCCCTGTCG
GCGGAAATCA ACTTTGCGGC GGCGAAACTG GCGCGAGCTT GTGCTGATGA GTGGACCGCG
CGCACGCCGG AGAAACCGCG CTACGTTGCC GGTGTTCTCG GCCCGACCAA CCGCACGGCG
TCTATTTCTC CGGACGTAAA TGATCCGGCA TTTCGTAATA TCACTTTTGA CGGGCTGGTG
GCGGCTTATC GAGAGTCCAC CAAAGCGCTG GTGGAAGGTG GCGCGGATCT GATCCTGATT
GAAACCGTTT TCGACACCCT TAACGCCAAA GCGGCGGTTT TTGCGGTGAA AACGGAGTTT
GAAGCGCTGG GCGTTGAGCT GCCGATTATG ATCTCCGGCA CCATCACCGA CGCCTCCGGG
CGCACGCTCT CCGGGCAGAC CACCGAAGCA TTTTACAACT CATTGCGCCA CGCCGAAGCT
CTGACCTTTG GCCTGAACTG TGCGCTGGGG CCCGATGAAC TGCGCCAGTA CGTGCAGGAG
CTGTCACGGA TTGCGGAATG CTACGTCACC GCGCACCCGA ACGCCGGGCT ACCCAACGCC
TTTGGTGAGT ACGATCTCGA CGCCGACACG ATGGCAAAAC AGATACGTGA ATGGGCGCAA
GCGGGTTTTC TCAATATCGT CGGCGGCTGC TGTGGCACCA CGCCACAACA TATTGCAGCG
ATGAGTCGTG CAGTAGAAGG ATTAGCGCCG CGCAAACTGC CGGAAATCCC CGTAGCCTGC
CGTTTGTCCG GCCTGGAGCC GCTGAACATT GGCGAAGATA GCCTGTTTGT GAACGTGGGT
GAACGCACCA ACGTCACCGG TTCCGCTAAG TTCAAGCGCC TGATCAAAGA AGAGAAATAC
AGCGAGGCAC TGGATGTGGC CCGCCAGCAG GTGGAAAACG GCGCGCAGAT TATCGATATC
AACATGGATG AAGGGATGCT CGACGCCGAA GCGGCGATGG TGCGTTTTCT CAATCTGATT
GCCGGTGAAC CGGATATCGC TCGCGTGCCG ATTATGATCG ACTCTTCAAA ATGGGATGTC
ATTGAAAAAG GTCTGAAGTG TATCCAGGGC AAAGGCATTG TTAACTCTAT CTCGATGAAA
GAGGGCGTCG ACGCCTTTAT CCATCACGCG AAGCTCTTGC GTCGTTACGG TGCGGCAGTG
GTGGTAATGG CCTTTGACGA ACAGGGACAG GCCGATACCC GCGCACGGAA AATCGAGATT
TGCCGTCGGG CGTACAAAAT CCTCACCGAA GAGGTTGGCT TCCCGCCAGA AGATATCATC
TTCGACCCGA ACATCTTCGC GGTCGCCACC GGCATTGAAG AGCACAACAA CTATGCGCAG
GACTTTATCG GCGCCTGCGA AGACATCAAA CGCGAACTGC CGCACGCGCT GATTTCCGGC
GGCGTATCTA ACGTTTCTTT CTCATTCCGT GGCAACGATC CGGTGCGCGA AGCCATTCAC
GCAGTGTTCC TCTACTACGC TATTCGCAAT GGCATGGATA TGGGGATCGT CAATGCCGGG
CAGCTGGCGA TTTACGACGA CCTGCCCGCT GAACTGCGCG ACGCGGTGGA AGATGTGATT
CTTAATCGTC GCGATGATGG CACTGAGCGT TTACTGGAGC TTGCCGAGAA ATATCGCGGC
AGCAAAACCG ACGACACCGC TAACGCCCAG CAGGCGGAGT GGCGCTCGTG GGAAGTGAAT
AAACGTCTGG AATACTCGCT GGTCAAAGGC ATTACTGAGT TTATCGAGCA GGATACCGAA
GAAGCCCGCC AGCAGGCTAC GCGCCCGATT GAAGTGATTG AAGGCCCGTT GATGGACGGC
ATGAACGTGG TCGGCGATCT GTTTGGCGAA GGCAAAATGT TCCTGCCACA GGTGGTCAAA
TCGGCGCGCG TCATGAAACA GGCGGTGGCC TACCTCGAAC CGTTTATTGA AGCCAGCAAA
GAGCAGGGCA AAACCAACGG CAAGATGGTG ATCGCCACCG TGAAGGGCGA CGTCCACGAC
ATCGGTAAAA ATATCGTTGG TGTGGTGCTG CAATGTAACA ACTACGAAAT TGTCGATCTC
GGCGTGATGG TGCCTGCGGA AAAAATTCTC CGTACCGCTA AAGAAGTGAA TGCTGATCTG
ATTGGACTTT CGGGGCTTAT CACGCCGTCG CTGGACGAGA TGGTTAACGT GGCGAAAGAG
ATGGAGCGTC AGGGCTTCAC CATTCCGTTA CTGATCGGTG GCGCGACGAC CTCAAAAGCG
CACACGGCGG TGAAAATTGA GCAGAACTAC AGCGGCCCGA CGGTGTATGT GCAGAATGCC
TCGCGCACCG TTGGTGTGGT GGCGGCGCTG CTTTCCGATA CTCAGCGCGA TGATTTTGTC
GCTCGTACCC GCAAGGAGTA CGAAACCGTA CGTATTCAGC ACGGGCGCAA GAAACCGCGC
ACACCACCGG TCACGCTGGA AGCGGCGCGC GATAACGACT TCGCTTTTGA CTGGCAGGCT
TACACGCCGC CGGTGGCGCA CCGTCTCGGC GTGCAGGAAG TCGAAGCCAG CATCGAAACG
CTGCGTAATT ACATCGACTG GACACCGTTC TTTATGACCT GGTCGCTGGC CGGGAAGTAT
CCGCGCATTC TGGAAGATGA AGTGGTGGGC GTTGAGGCGC AGCGGCTGTT TAAAGACGCC
AACGACATGC TGGATAAATT AAGCGCCGAG AAAACGCTGA ATCCGCGTGG CGTGGTGGGC
CTGTTCCCGG CAAACCGTGT GGGCGATGAC ATTGAAATCT ACCGTGACGA AACGCGTACC
CATGTGATCA ACGTCAGCCA CCATCTGCGT CAACAGACCG AAAAAACAGG CTTCGCTAAC
TACTGTCTCG CTGACTTCGT TGCGCCGAAG CTTTCTGGTA AAGCAGATTA CATCGGCGCA
TTTGCCGTGA CTGGCGGGCT GGAAGAGGAC GCACTGGCTG ATGCCTTTGA AGCGCAGCAC
GATGATTACA ACAAAATCAT GGTGAAAGCG CTTGCCGACC GTTTAGCCGA AGCCTTTGCG
GAGTATCTCC ATGAGCGTGT GCGTAAAGTC TACTGGGGCT ATGCGCCGAA CGAGAACCTC
AGCAACGAAG AGCTGATCCG CGAAAACTAC CAGGGCATCC GTCCGGCACC GGGCTATCCG
GCCTGCCCGG AACATACGGA AAAAGCCACC ATCTGGGAGC TGCTGGAAGT GGAAAAACAC
ACTGGCATGA AACTCACAGA ATCTTTCGCC ATGTGGCCCG GTGCATCGGT TTCGGGTTGG
TACTTCAGCC ACCCGGACAG CAAGTACTAC GCTGTAGCAC AAATTCAGCG CGATCAGGTT
GAAGATTATG CCCGCCGTAA AGGTATGAGC GTTACCGAAG TTGAGCGCTG GCTGGCACCG
AATCTGGGGT ATGACGCGGA CTGA
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| Protein sequence | MSSKVEQLRA QLNERILVLD GGMGTMIQSY RLNEADFRGE RFADWPCDLK GNNDLLVLSK
PEVIAAIHNA YFEAGADIIE TNTFNSTTIA MADYQMESLS AEINFAAAKL ARACADEWTA
RTPEKPRYVA GVLGPTNRTA SISPDVNDPA FRNITFDGLV AAYRESTKAL VEGGADLILI
ETVFDTLNAK AAVFAVKTEF EALGVELPIM ISGTITDASG RTLSGQTTEA FYNSLRHAEA
LTFGLNCALG PDELRQYVQE LSRIAECYVT AHPNAGLPNA FGEYDLDADT MAKQIREWAQ
AGFLNIVGGC CGTTPQHIAA MSRAVEGLAP RKLPEIPVAC RLSGLEPLNI GEDSLFVNVG
ERTNVTGSAK FKRLIKEEKY SEALDVARQQ VENGAQIIDI NMDEGMLDAE AAMVRFLNLI
AGEPDIARVP IMIDSSKWDV IEKGLKCIQG KGIVNSISMK EGVDAFIHHA KLLRRYGAAV
VVMAFDEQGQ ADTRARKIEI CRRAYKILTE EVGFPPEDII FDPNIFAVAT GIEEHNNYAQ
DFIGACEDIK RELPHALISG GVSNVSFSFR GNDPVREAIH AVFLYYAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRDDGTER LLELAEKYRG SKTDDTANAQ QAEWRSWEVN
KRLEYSLVKG ITEFIEQDTE EARQQATRPI EVIEGPLMDG MNVVGDLFGE GKMFLPQVVK
SARVMKQAVA YLEPFIEASK EQGKTNGKMV IATVKGDVHD IGKNIVGVVL QCNNYEIVDL
GVMVPAEKIL RTAKEVNADL IGLSGLITPS LDEMVNVAKE MERQGFTIPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRTVGVVAAL LSDTQRDDFV ARTRKEYETV RIQHGRKKPR
TPPVTLEAAR DNDFAFDWQA YTPPVAHRLG VQEVEASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG VEAQRLFKDA NDMLDKLSAE KTLNPRGVVG LFPANRVGDD IEIYRDETRT
HVINVSHHLR QQTEKTGFAN YCLADFVAPK LSGKADYIGA FAVTGGLEED ALADAFEAQH
DDYNKIMVKA LADRLAEAFA EYLHERVRKV YWGYAPNENL SNEELIRENY QGIRPAPGYP
ACPEHTEKAT IWELLEVEKH TGMKLTESFA MWPGASVSGW YFSHPDSKYY AVAQIQRDQV
EDYARRKGMS VTEVERWLAP NLGYDAD
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