Gene EcolC_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4002 
Symbol 
ID6064554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4396275 
End bp4397012 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID641603413 
Producthypothetical protein 
Protein accessionYP_001726928 
Protein GI170021974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.413417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC AAACTTTTGT CGCGTTGCTT TTGAGTGTGG GAGCGTCATC GGTCTTCGCG 
GCAGGAACCG TCAAGGTGTT CAGCAATGGC AGCAGTGAGG CCAAAACGCT AACGGGCGCA
GAGCATTTAA TCGATCTGGT AGGCCAACCG CGGCTGGCAA ACAGCTGGTG GCCCGGTGCG
GTGATTAGCG AAGAGCTGGC AACGGCGGCA GCATTGCGGC AGCAGCAGGC GTTGCTGACA
CGGCTGGCAG AACTGGCTGC AGATTCCAGC GCCGACGATG CCGCCGCGAT TAACGCCTTA
CGCCAGCAAA TTCAGGCGTT GAAAGTGACG GGCAGGCAAA AAATCAATCT TGATCCTGAT
ATCGTCCGCG TTGCCGAACG CGGTAACCCA CCGTTGCAGG GCAACTACAC GCTGTGGGTC
GGGCCACCAC CGTCCACGGT CACGCTGTTC GGGCTTATCA GCCGTCCTGG CAAGCAGCCA
TTCACTCCAG GTCGCGACGT GGCGAGCTAT CTCTCCGGGC AGAACCTGCT TAGCGGTGCG
GATCGCAGCT ACGCGTGGGT GGTTTACCCG GACGGACGCA CGCAAAAAGC GCCGGTGGCT
TACTGGAACA AGCGTCACGT AGAGCCGATG CCCGGCAGCA TTATTTATGT TGGCCTCGCG
GACTCCGTCT GGAGTGAGAC GCCTGATGCC CTTAACGCCG ACATTCTTCA GACTCTGACG
CAGCGGATAC CCCAATAA
 
Protein sequence
MIKQTFVALL LSVGASSVFA AGTVKVFSNG SSEAKTLTGA EHLIDLVGQP RLANSWWPGA 
VISEELATAA ALRQQQALLT RLAELAADSS ADDAAAINAL RQQIQALKVT GRQKINLDPD
IVRVAERGNP PLQGNYTLWV GPPPSTVTLF GLISRPGKQP FTPGRDVASY LSGQNLLSGA
DRSYAWVVYP DGRTQKAPVA YWNKRHVEPM PGSIIYVGLA DSVWSETPDA LNADILQTLT
QRIPQ