Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3993 |
Symbol | lamB |
ID | 6064537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4384598 |
End bp | 4385938 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641603404 |
Product | maltoporin |
Protein accession | YP_001726919 |
Protein GI | 170021965 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.571058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATTA CTCTGCGCAA ACTTCCTCTG GCGGTTGCCG TCGCAGCGGG CGTAATGTCT GCTCAGGCAA TGGCTGTTGA TTTCCACGGC TATGCACGTT CCGGTATTGG TTGGACAGGT AGCGGCGGTG AACAACAGTG TTTCCAGACT ACCGGTGCTC AAAGTAAATA CCGTCTTGGC AACGAATGTG AAACTTATGC TGAATTAAAA TTGGGTCAGG AAGTGTGGAA AGAGGGCGAT AAGAGCTTCT ATTTCGACAC TAACGTGGCC TATTCCGTCG CACAACAGAA TGACTGGGAA GCTACCGATC CGGCCTTCCG TGAAGCAAAC GTGCAGGGTA AAAACCTGAT CGAATGGCTG CCAGGCTCCA CCATCTGGGC AGGTAAGCGC TTCTACCAAC GTCATGACGT TCATATGATC GACTTCTACT ACTGGGATAT TTCTGGTCCT GGTGCCGGTC TGGAAAACAT CGATGTTGGC TTCGGTAAAC TCTCTCTGGC AGCAACCCGC TCCTCTGAAG CTGGTGGTTC TTCCTCTTTT GCCAGCAACA ATATTTATGA CTATACCAAC GAAACCGCGA ACGACGTTTT CGATGTGCGT TTAGCGCAGA TGGAAATCAA CCCGGGCGGC ACATTAGAAC TGGGTGTCGA CTACGGTCGT GCCAACCTGC GTGATAACTA TCGTCTGGTT GATGGCGCAT CGAAAGACGG CTGGTTATTC ACTGCTGAAC ATACTCAGAG TGTCCTGAAG GGCTTTAACA AGTTTGTTGT TCAGTACGCT ACTGACTCGA TGACCTCGCA GGGTAAAGGT CTGTCGCAGG GTTCTGGCGT CGCGTTTGAT AACGAAAAAT TTGCCTACAA TATCAACAAC AACGGTCACA TGCTGCGTAT CCTCGACCAC GGTGCGATCT CCATGGGCGA CAACTGGGAC ATGATGTACG TGGGTATGTA CCAGGATATC AACTGGGATA ACGACAACGG CACCAAGTGG TGGACCGTTG GTATTCGCCC GATGTACAAG TGGACGCCAA TCATGAGCAC CGTGATGGAA ATCGGCTACG ACAACGTCGA ATCCCAGCGC ACCGGCGACA AGAACAATCA GTACAAAATT ACCCTCGCAC AACAATGGCA GGCTGGCGAC AGCATCTGGT CACGCCCGGC TATTCGTGTC TTCGCAACCT ACGCCAAGTG GGATGAGAAA TGGGGTTATG ACTACAACGG CGATAGCAAG GTTAACCCGA ACTACGGCAA AGCCGTTCCT GCTGATTTCA ACGGCGGCAG CTTCGGTCGT GGCGACAGCG ACGAGTGGAC CTTCGGTGCC CAGATGGAAA TCTGGTGGTA A
|
Protein sequence | MMITLRKLPL AVAVAAGVMS AQAMAVDFHG YARSGIGWTG SGGEQQCFQT TGAQSKYRLG NECETYAELK LGQEVWKEGD KSFYFDTNVA YSVAQQNDWE ATDPAFREAN VQGKNLIEWL PGSTIWAGKR FYQRHDVHMI DFYYWDISGP GAGLENIDVG FGKLSLAATR SSEAGGSSSF ASNNIYDYTN ETANDVFDVR LAQMEINPGG TLELGVDYGR ANLRDNYRLV DGASKDGWLF TAEHTQSVLK GFNKFVVQYA TDSMTSQGKG LSQGSGVAFD NEKFAYNINN NGHMLRILDH GAISMGDNWD MMYVGMYQDI NWDNDNGTKW WTVGIRPMYK WTPIMSTVME IGYDNVESQR TGDKNNQYKI TLAQQWQAGD SIWSRPAIRV FATYAKWDEK WGYDYNGDSK VNPNYGKAVP ADFNGGSFGR GDSDEWTFGA QMEIWW
|
| |