Gene EcolC_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3987 
Symbol 
ID6064530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4377443 
End bp4379866 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content55% 
IMG OID641603400 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_001726915 
Protein GI170021961 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.487396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCT GGCCACGAAT TTACTACAAA TTACTGAATT TACCATTAAG CATCCTGGTA 
AAAAGCAAGT CTATTCCGGC AGATCCTGCC CCGGAACTGG GGCTGGATAC CTCTCGTCCA
ATTATGTACG TTTTACCGTA CAACTCGAAA GCAGATTTGC TGACGTTACG CGCCCAGTGT
CTGGCTCATG ACTTGCCTGA CCCGTTAGAG CCGCTGGAAA TCGACGGCAC GCTACTGCCG
CGCTATGTGT TCATTCACGG CGGGCCGCGT GTATTCACCT ATTACACGCC GAAAGAAGAG
TCTATTAAGC TGTTCCACGA CTATCTCGAT TTGCACCGTA GCAACCCAAA TCTGGATGTG
CAGATGGTGC CAGTATCGGT GATGTTTGGT CGCGCGCCGG GGCGTGAAAA AGGCGAAGTA
AACCCGCCGC TGCGTATGCT TAACGGCGTA CAGAAATTTT TCGCCGTACT GTGGCTCGGT
CGCGACAGTT TTGTGCGTTT CTCGCCGTCA GTTTCGCTGC GCCGTATGGC GGATGAACAC
GGCACGGATA AAACTATCGC ACAGAAACTG GCGCGCGTGG CGCGTATGCA CTTTGCCCGT
CAACGTCTGG CTGCTGTGGG CCCACGTCTG CCTGCTCGTC AGGATCTGTT TAATAAGCTG
CTCGCCTCCC GCGCCATTGC CAAAGCGGTA GAAGATGAAG CGCGCAGCAA AAAAATCTCC
CATGAAAAAG CGCAGCAGAA CGCGATTGCG CTGATGGAAG AGATTGCGGC GAATTTCTCT
TACGAGATGA TTCGCCTGAC TGACCGTATT CTGGGCTTCA CCTGGAACCG CCTTTACCAG
GGCATCAACG TCCATAACGC CGAGCGCGTT CGCCAGCTGG CCCACGACGG TCATGAGCTG
GTATATGTGC CTTGCCACCG CAGCCACATG GACTACCTGC TGCTTTCTTA CGTGCTGTAT
CACCAGGGGC TGGTGCCGCC GCATATCGCC GCTGGGATCA ACCTGAACTT CTGGCCGGCC
GGGCCGATTT TCCGCCGTCT GGGGGCGTTC TTTATTCGCC GTACTTTTAA AGGCAATAAA
CTTTATTCCA CCGTTTTCCG TGAGTATCTC GGCGAACTGT TCAGCCGTGG TTATTCCGTC
GAGTACTTCG TGGAAGGCGG TCGTTCCCGC ACGGGGCGTT TGCTGGATCC GAAAACCGGT
ACGCTGTCGA TGACCATTCA GGCGATGCTG CGTGGCGGCA CGCGTCCGAT TACGCTGATT
CCGATCTACA TCGGTTATGA GCACGTCATG GAAGTGGGTA CTTACGCCAA AGAACTGCGC
GGCGCGACGA AAGAGAAAGA GAGCCTGCCG CAGATGCTGC GCGGTTTAAG CAAGCTGCGT
AATCTCGGTC AGGGTTACGT CAACTTCGGT GAACCAATGC CGTTGATGAC CTACCTTAAC
CAGCACGTAC CAGACTGGCG TGAATCTATC GATCCCATCG AAGCGGTGCG TCCGGCATGG
TTAACGCCGA CGGTCAATAA TATTGCTGCC GATCTGATGG TACGCATTAA CAACGCAGGC
GCGGCAAACG CCATGAACCT GTGCTGTACT GCGCTTCTGG CGTCACGTCA GCGCTCACTC
ACCCGCGAGC AGTTAACCGA GCAACTCAAC TGCTACCTGG ATCTGATGCG CAACGTACCT
TACTCCACGG ACTCTACCGT TCCTTCAGCC AGCGCCAGCG AGCTTATCGA TCACGCGCTG
CAAATGAACA AGTTTGAAGT CGAGAAAGAC ACAATCGGCG ACATCATCAT TCTGCCGCGC
GAGCAAGCGG TGTTGATGAC CTACTATCGC AACAACATTG CGCATATGTT GGTGCTGCCT
TCGCTGATGG CGGCAATTGT CACCCAGCAT CGCCACATCT CCCGCGACGT ATTGATGGAG
CACGTCAATG TGCTTTACCC AATGCTGAAA GCGGAGCTGT TCCTGCGCTG GGATCGCGAC
GAGTTGCCGG ACGTTATCGA TGCGCTGGCA AATGAGATGC AACGTCAGGG GCTGATTACC
CTGCAAGATG ATGAGTTGCA TATCAACCCG GCGCATTCTC GCACACTACA GCTGCTGGCC
GCAGGCGCGC GCGAAACGCT GCAACGTTAT GCCATTACCT TCTGGCTGTT GAGCGCCAAC
CCGTCGATTA ACCGCGGTAC GCTGGAGAAA GAGAGCCGCA CTGTCGCGCA ACGTCTCTCC
GTGCTGCACG GCATCAACGC GCCGGAGTTC TTCGACAAGG CGGTGTTCAG TTCTCTGGTG
CTGACGCTGC GTGATGAAGG GTATATCAGC GATAGCGGCG ACGCCGAACC GGCAGAAACG
ATGAAGGTTT ATCAGTTACT GGCGGAGTTG ATTACATCAG ACGTGCGTTT GACGATTGAG
AGTGCGACGC AGGGCGAAGG GTAA
 
Protein sequence
MSGWPRIYYK LLNLPLSILV KSKSIPADPA PELGLDTSRP IMYVLPYNSK ADLLTLRAQC 
LAHDLPDPLE PLEIDGTLLP RYVFIHGGPR VFTYYTPKEE SIKLFHDYLD LHRSNPNLDV
QMVPVSVMFG RAPGREKGEV NPPLRMLNGV QKFFAVLWLG RDSFVRFSPS VSLRRMADEH
GTDKTIAQKL ARVARMHFAR QRLAAVGPRL PARQDLFNKL LASRAIAKAV EDEARSKKIS
HEKAQQNAIA LMEEIAANFS YEMIRLTDRI LGFTWNRLYQ GINVHNAERV RQLAHDGHEL
VYVPCHRSHM DYLLLSYVLY HQGLVPPHIA AGINLNFWPA GPIFRRLGAF FIRRTFKGNK
LYSTVFREYL GELFSRGYSV EYFVEGGRSR TGRLLDPKTG TLSMTIQAML RGGTRPITLI
PIYIGYEHVM EVGTYAKELR GATKEKESLP QMLRGLSKLR NLGQGYVNFG EPMPLMTYLN
QHVPDWRESI DPIEAVRPAW LTPTVNNIAA DLMVRINNAG AANAMNLCCT ALLASRQRSL
TREQLTEQLN CYLDLMRNVP YSTDSTVPSA SASELIDHAL QMNKFEVEKD TIGDIIILPR
EQAVLMTYYR NNIAHMLVLP SLMAAIVTQH RHISRDVLME HVNVLYPMLK AELFLRWDRD
ELPDVIDALA NEMQRQGLIT LQDDELHINP AHSRTLQLLA AGARETLQRY AITFWLLSAN
PSINRGTLEK ESRTVAQRLS VLHGINAPEF FDKAVFSSLV LTLRDEGYIS DSGDAEPAET
MKVYQLLAEL ITSDVRLTIE SATQGEG