Gene EcolC_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3982 
Symbol 
ID6064524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4373906 
End bp4374421 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID641603395 
Productzinc uptake transcriptional repressor 
Protein accessionYP_001726910 
Protein GI170021956 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.224982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CCACAACGCA GGAGTTATTA GCGCAGGCTG AAAAAATCTG CGCGCAGCGT 
AATGTGCGCC TGACCCCACA GCGCCTGGAA GTGTTGCGCC TGATGAGTCT GCAGGATGGC
GCTATCAGCG CTTATGATCT GCTTGATTTG CTGCGCGAAG CTGAACCGCA AGCCAAGCCG
CCAACGGTTT ATCGCGCGCT GGATTTTCTG CTTGAGCAAG GTTTTGTGCA TAAGGTGGAA
TCCACCAACA GTTATGTGCT CTGCCATCTG TTCGACCAGC CCACCCATAC GTCAGCTATG
TTTATTTGCG ATCGCTGCGG CGCGGTGAAA GAAGAATGTG CAGAAGGCGT GGAAGACATC
ATGCATACGC TGGCGGCAAA AATGGGGTTT GCCCTGCGGC ATAATGTGAT TGAAGCACAT
GGGCTCTGTG CGGCATGCGT GGAAGTGGAA GCGTGTCGTC ATCCTGAACA GTGCCAGCAT
GATCACTCTG TGCAGGTGAA AAAGAAACCG CGTTAA
 
Protein sequence
MEKTTTQELL AQAEKICAQR NVRLTPQRLE VLRLMSLQDG AISAYDLLDL LREAEPQAKP 
PTVYRALDFL LEQGFVHKVE STNSYVLCHL FDQPTHTSAM FICDRCGAVK EECAEGVEDI
MHTLAAKMGF ALRHNVIEAH GLCAACVEVE ACRHPEQCQH DHSVQVKKKP R