| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3979 |
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| Symbol | |
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| ID | 6064516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4371166 |
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| End bp | 4372203 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641603392 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001726907 |
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| Protein GI | 170021953 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.16691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGTA ATTCTGAAAT GCAAAAAATC AACCAAACCA GCGCAATGCC TGAAAAAACT
GACGTTCACT GGAGTGGTCG GTTTAGCGTT GCACCAATGC TCGACTGGAC GGACAGACAT
TGCCGCTATT TCTTGCGTCT GCTTTCCCGC AATACGTTGC TGTATACCGA AATGGTGACC
ACAGGGGCGA TTATTCACGG TAAAGGTGAT TACCTGGCGT ACAGTGAAGA AGAACATCCG
GTAGCGTTGC AACTCGGCGG TAGCGATCCG GCGGCGCTGG CACAGTGTGC GAAGCTGGCA
GAAGCGCGTG GATATGATGA GATCAACCTG AATGTCGGCT GCCCGTCTGA CCGGGTGCAG
AACGGCATGT TTGGTGCGTG TCTGATGGGT AATGCGCAGC TGGTTGCCGA CTGCGTGAAA
GCGATGCGCG ATGTGGTGTC GATTCCGGTG ACGGTGAAAA CGCGTATTGG CATCGACGAC
CAGGACAGCT ATGAATTTCT CTGCGATTTC ATCAACACCG TTTCCGGCAA AGGCGAGTGT
GAGATGTTCA TCATCCATGC ACGTAAAGCC TGGCTTTCGG GGTTAAGTCC GAAAGAAAAC
CGTGAGATCC CGCCGCTCGA TTATCCGCGT GTGTATCAAC TGAAGCGTGA CTTTCCGCAT
CTGACAATGT CGATTAACGG TGGTATCAAG TCGCTGGAAG AGGCCAAAGC ACACCTGCAA
CATATGGATG GCGTGATGGT CGGGCGCGAG GCGTATCAGA ATCCGGGTAT TCTGGCGGCG
GTAGACCGGG AGATCTTTGG TTCCTCGGAT ATCGATGCCG ATCCGGTGGC GGTAGTGCGC
GCCATGTATC CGTACATTGA GCGTGAACTC AGCCAGGGGA CGTATCTCGG TCATATTACC
CGGCATATGT TGGGCTTGTT CCAGGGTATT CCTGGCGCGC GGCAGTGGCG GCGTTATTTA
AGTGAAAATG CCCATAAAGC GGGTGCAGAC ATTAATGTGC TGGAACACGC GCTCAAACTG
GTGGCGGATA AGCGTTAA
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| Protein sequence | MHGNSEMQKI NQTSAMPEKT DVHWSGRFSV APMLDWTDRH CRYFLRLLSR NTLLYTEMVT
TGAIIHGKGD YLAYSEEEHP VALQLGGSDP AALAQCAKLA EARGYDEINL NVGCPSDRVQ
NGMFGACLMG NAQLVADCVK AMRDVVSIPV TVKTRIGIDD QDSYEFLCDF INTVSGKGEC
EMFIIHARKA WLSGLSPKEN REIPPLDYPR VYQLKRDFPH LTMSINGGIK SLEEAKAHLQ
HMDGVMVGRE AYQNPGILAA VDREIFGSSD IDADPVAVVR AMYPYIEREL SQGTYLGHIT
RHMLGLFQGI PGARQWRRYL SENAHKAGAD INVLEHALKL VADKR
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