Gene EcolC_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3971 
Symbol 
ID6064506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4363198 
End bp4363614 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content52% 
IMG OID641603384 
Producthypothetical protein 
Protein accessionYP_001726899 
Protein GI170021945 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.147621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTATC AAAAGACGCT CACGCTTAGC GCCAAATCTC GTGGGTTTCA TCTGGTAACG 
GATGAAATTC TGAATCAGCT GGCTGATATG CCGCGCGTTA ACATCGGCTT ACTGCATCTG
TTGCTGCAAC ATACCTCCGC CTCTCTGACA CTTAATGAGA ACTGCGATCC CACCGTACGC
CACGACATGG AGCGTTTTTT CCTCCGCACC GTTCCCGACA ACGGAAATTA TGAGCATGAC
TATGAGGGAG CAGACGATAT GCCTTCTCAT ATCAAATCCT CAATGCTGGG AACATCGCTT
GTATTGCCGG TACATAAAGG GCGTATTCAG ACCGGCACCT GGCAAGGCAT CTGGCTGGGG
GAACATCGCA TCCACGGCGG ATCGCGTCGC ATCATCGCGA CACTACAAGG GGAGTAA
 
Protein sequence
MWYQKTLTLS AKSRGFHLVT DEILNQLADM PRVNIGLLHL LLQHTSASLT LNENCDPTVR 
HDMERFFLRT VPDNGNYEHD YEGADDMPSH IKSSMLGTSL VLPVHKGRIQ TGTWQGIWLG
EHRIHGGSRR IIATLQGE