| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3962 |
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| Symbol | |
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| ID | 6064489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4352222 |
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| End bp | 4353871 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603375 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_001726890 |
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| Protein GI | 170021936 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00930832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAATCT TCTTCACCAT ACTGATAATG ACCCTCGTGG TCTCGCTGTC CGGGGTGGTC
ACTCGTGTCA TGCCCTTTCA GATCCCGCTT CCGCTTATGC AAATCGCCAT CGGTGCGCTA
CTGGCGTGGC CGACGTTTGG TTTGCATGTG GAGTTTGATC CTGAACTCTT TTTAGTCTTG
TTTATCCCGC CGTTGCTGTT CGCTGATGGC TGGAAAACGC CGACCCGTGA ATTTCTTGAA
CATGGTCGAG AGATTTTCGG CCTCGCACTG GCGCTGGTGG TGGTCACCGT GGTCGGCATT
GGCTTCCTTA TTTACTGGGT GGTGCCGGGC ATTCCGCTGA TCCCCGCCTT TGCGCTGGCG
GCGGTGCTTT CTCCGACCGA TGCTGTGGCG CTCTCCGGGA TTGTTGGCGA AGGGCGCATC
CCGAAAAAAA TCATGGGCAT TTTGCAGGGC GAAGCGTTGA TGAATGACGC CTCCGGCCTG
GTGTCGTTGA AGTTTGCCGT GGCAGTGGCG ATGGGGACGA TGATCTTCAC CGTTGGCGGT
GCAACGGTCG AATTTATGAA AGTAGCCATT GGCGGTATTC TCGCTGGTTT TGTGGTGAGC
TGGCTGTATG GTCGCTCGCT GCGATTCCTC AGCCGCTGGG GCGGTGATGA ACCCGCGACG
CAGATCGTTC TGCTGTTCTT GCTGCCATTC GCTTCTTATC TGATTGCCGA ACATATTGGC
GTTTCGGGCA TCCTCGCTGC GGTTGCCGCC GGGATGACCA TCACCCGCTC CGGTGTGATG
CGCCGTGCGC CGCTGGCAAT GCGCCTGCGT GCAAACAGCA CCTGGGCGAT GCTGGAATTT
GTCTTTAACG GCATGGTGTT CCTGCTGTTA GGTCTGCAGC TGCCGGGTAT TCTGGAGACG
TCGCTGATGG CGGCAGAAAT CGACCCTAAC GTCGAAATCT GGATGCTGTT TACCGATATT
ATTCTGATAT ATGCGGCGCT GATGCTGGTC CGTTTCGGCT GGCTGTGGAC GATGAAAAAG
TTCAGCAACC GCTTCCTGAA GAAGAAGCCG ATGGAGTTTG GTTCGTGGAC CACACGAGAA
ATCCTGATCG CGTCTTTCGC CGGGGTGCGT GGGGCGATCA CTCTGGCCGG TGTGCTCTCT
ATCCCGCTGC TCTTGCCGGA TGGTAACGTC TTCCCGGCGC GCTATGAGCT GGTGTTCCTG
GCGGCTGGCG TCATTCTCTT CTCGCTGTTT GTCGGCGTGG TGATGTTGCC TATTCTGCTA
CAACACATTG AAGTCGCGGA CCATTCGCAA CAATTGAAAG AGGAACGTAT TGCGCGAGCG
GCAACGGCAG AAGTGGCGAT TGTGGCGATC CAGAAAATGG AGGAGCGTCT GGCGGCGGAT
ACCGAAGAGA ATATCGATAA CCAGCTGCTT ACGGAGGTCA GTTCTCGCGT CATTGGTAAC
CTGCGTCGTC GCGCCGATGG ACGTAACGAC GTTGAAAGTT CCGTGCAGGA AGAGAACCTT
GAGCGTCGCT TCCGTCTGGC GGCATTGCGT TCTGAACGTG CTGAACTTTA CCACCTGCGC
GCCACGCGGG AGATCAGCAA CGAAACGCTG CAAAAATTAC TGCACGATCT CGATTTGCTT
GAAGCGTTGC TAATTGAGGA AAATCAGTAA
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| Protein sequence | MEIFFTILIM TLVVSLSGVV TRVMPFQIPL PLMQIAIGAL LAWPTFGLHV EFDPELFLVL
FIPPLLFADG WKTPTREFLE HGREIFGLAL ALVVVTVVGI GFLIYWVVPG IPLIPAFALA
AVLSPTDAVA LSGIVGEGRI PKKIMGILQG EALMNDASGL VSLKFAVAVA MGTMIFTVGG
ATVEFMKVAI GGILAGFVVS WLYGRSLRFL SRWGGDEPAT QIVLLFLLPF ASYLIAEHIG
VSGILAAVAA GMTITRSGVM RRAPLAMRLR ANSTWAMLEF VFNGMVFLLL GLQLPGILET
SLMAAEIDPN VEIWMLFTDI ILIYAALMLV RFGWLWTMKK FSNRFLKKKP MEFGSWTTRE
ILIASFAGVR GAITLAGVLS IPLLLPDGNV FPARYELVFL AAGVILFSLF VGVVMLPILL
QHIEVADHSQ QLKEERIARA ATAEVAIVAI QKMEERLAAD TEENIDNQLL TEVSSRVIGN
LRRRADGRND VESSVQEENL ERRFRLAALR SERAELYHLR ATREISNETL QKLLHDLDLL
EALLIEENQ
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