Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3955 |
Symbol | |
ID | 6064471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4343370 |
End bp | 4344041 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641603368 |
Product | cytochrome c nitrite reductase, Fe-S protein |
Protein accession | YP_001726883 |
Protein GI | 170021929 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.985207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGT CTCGTCGCCA GTTTCTCACC GGCGTCGGCG TGCTGGCAGC CGTCAGCGGC ACCGCAGGAC GCGTGGTGGC GAAAACGTTG AATATCAATG GGGTGCGTTA CGGCATGGTG CATGACGAGT CGTTATGCAT CGGCTGTACC GCCTGTATGG ATGCTTGTCG GGAAGTGAAC AAGGTGCCGG AAGGCGTCTC GCGCCTGACA ATTATTCGTA GCGAGCCACA GGGCGAATTT CCTGATGTGA AATATCGCTT CTTCCGTAAG TCTTGCCAGC ACTGCGATCA TGCGCCGTGC GTTGACGTCT GCCCGACCGG TGCGTCTTTT CGCGATGCTG CCAGTGGGAT TGTCGATGTT AATCCGGATC TCTGCGTCGG TTGTCAGTAC TGCATCGCCG CCTGTCCGTA CCGCGTGCGC TTTATCCATC CGGTCACGAA GACGGCGGAC AAATGCGATT TCTGCCGTAA GACCAATTTG CAGGCCGGTA AGCTGCCCGC GTGCGTTGAG GCTTGCCCGA CCAAGGCGCT GACGTTTGGC AATCTGGACG ATCCTAACAG TGAGATTTCG CAACTGCTGC GCCAGAAGCC TACTTACCGC TACAAGCTGG CGCTGGGAAC CAAACCGAAG CTGTACCGCG TACCGTTTAA ATACGGGGAG GTGAGCCAAT GA
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Protein sequence | MTWSRRQFLT GVGVLAAVSG TAGRVVAKTL NINGVRYGMV HDESLCIGCT ACMDACREVN KVPEGVSRLT IIRSEPQGEF PDVKYRFFRK SCQHCDHAPC VDVCPTGASF RDAASGIVDV NPDLCVGCQY CIAACPYRVR FIHPVTKTAD KCDFCRKTNL QAGKLPACVE ACPTKALTFG NLDDPNSEIS QLLRQKPTYR YKLALGTKPK LYRVPFKYGE VSQ
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