| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3953 |
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| Symbol | |
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| ID | 6064469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4340679 |
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| End bp | 4342301 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641603366 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_001726881 |
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| Protein GI | 170021927 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTGGC CTGCCATGAT GCGACTTACT TGCATCGGCA TTCTGGCGCA GTTCGCGCTC
CTGCTGCTCG CCTTTGGCGT ACTGACGTAT TGTTTTCTCA TCAGCGATTT CTCGGTCATT
TATGTCGCCC AACATAGCTA CAGCCTGCTG TCGTGGGAAC TCAAACTGGC GGCGGTATGG
GGTGGTCATG AAGGTTCGCT GCTGCTTTGG GTTCTGCTGC TTTCCGCCTG GAGCACGCTG
TTTGCCTGGC ATTATCGGCA GCAAACCGAT CCGCTATTTC CGCTGACGCT AGCCGTTTTA
TCTCTCATGC TCGCCGCACT GCTACTGTTT GTAGTGCTGT GGTCCGATCC CTTCGTGCGG
ATATTTCCAC CAGCAATCGA AGGCCGCGAT CTCAATCCGA TGCTGCAACA TCCCGGTCTT
ATCTTTCATC CACCGCTGCT TTACCTTGGC TATGGCGGTT TGATGGTAGC GGCGAGCGTG
GCGCTGGCGA GTTTACTGCG CAGCGAGTTT GATGGTGCCT GCGCCCGAAT TTGCTGGCGC
TGGGCACTAC CTGGCTGGAG CGCATTAACG GCGGGGATCA TTCTCGGTTC CTGGTGGGCC
TATTGCGAAC TGGGCTGGGG CGGCTGGTGG TTCTGGGATC CGGTGGAAAA CGCCTCTTTA
TTACCCTGGC TTTCTGCCAC TGCGCTGCTG CACAGTTTGT CCCTGACACG CCAGCGGGGG
ATTTTCCGCC ACTGGTCGCT GTTGCTGGCG ATAGTTACTC TGATGCTGTC GCTGCTGGGC
ACCTTAATTG TCCGTTCTGG CATTCTGGTT TCGGTTCATG CGTTCGCGCT GGATAACGTC
CGCGCCGTGC CGTTGTTCAG CCTGTTTGCA CTGATTAGCC TTGCGTCTCT GGCTCTGTAT
GGCTGGCGAG CGCGGGACGG TGGCCCGGCG GTGCGTTTTT CGGGGTTATC GCGGGAAATG
TTAATCCTCG CTACGCTGTT GCTGTTTTGC GCAGTGCTAC TGATCGTGCT GGTGGGAACT
CTTTATCCGA TGATTTACGG TCTGCTGGGC TGGGGACGCC TCTCCGTTGG CGCGCCGTAT
TTTAACCGCG CGACGTTACC GTTTGGTCTG TTGATGCTGG TGGTGATTGT GCTGGCGACG
TTTGTCTCTG GCAAACGCGT GCAGCTTCCG GCGCTGGTAG CTCATGCTGG CGTGCTGTTA
TTTGCCGCGG GGATCGTGGT TTCCAGCGTC AGTCGTCAGG AGATCAGCCT CAATTTACAG
CCGGGTCAGC AGGTGACGCT GGCAGGATAC ACCTTCCGTT TTGAGCGACT CGATCTGCAA
GCCAGAGGCA ATTACACCAG CGAAAAAGCG ATAGTGGCAC TGTTTGACCA TCAGCAACGT
ATTGGTGAAC TGACGCCGGA GCGGCGTTTT TATGAAGCAC GCCGTCAGCA AATGATGGAA
CCGTCAATTC GCTGGAACGG CATCCATGAC TGGTATGCGG TCATGGGGGA GAAAACTGGG
CCGGATCGTT ACGCTTTTCG TTTGTATGTA CAAAGCGGTG TGCGCTGGAT CTGGGGGGGA
GGATTGTTGA TGATTGCAGG CGCATTATTA AGCGGATGGC GGGGGAGGAA GCGCGATGAA
TAA
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| Protein sequence | MRWPAMMRLT CIGILAQFAL LLLAFGVLTY CFLISDFSVI YVAQHSYSLL SWELKLAAVW
GGHEGSLLLW VLLLSAWSTL FAWHYRQQTD PLFPLTLAVL SLMLAALLLF VVLWSDPFVR
IFPPAIEGRD LNPMLQHPGL IFHPPLLYLG YGGLMVAASV ALASLLRSEF DGACARICWR
WALPGWSALT AGIILGSWWA YCELGWGGWW FWDPVENASL LPWLSATALL HSLSLTRQRG
IFRHWSLLLA IVTLMLSLLG TLIVRSGILV SVHAFALDNV RAVPLFSLFA LISLASLALY
GWRARDGGPA VRFSGLSREM LILATLLLFC AVLLIVLVGT LYPMIYGLLG WGRLSVGAPY
FNRATLPFGL LMLVVIVLAT FVSGKRVQLP ALVAHAGVLL FAAGIVVSSV SRQEISLNLQ
PGQQVTLAGY TFRFERLDLQ ARGNYTSEKA IVALFDHQQR IGELTPERRF YEARRQQMME
PSIRWNGIHD WYAVMGEKTG PDRYAFRLYV QSGVRWIWGG GLLMIAGALL SGWRGRKRDE
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