| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3952 |
|---|
| Symbol | |
|---|
| ID | 6064468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4340303 |
|---|
| End bp | 4340686 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641603365 |
|---|
| Product | formate-dependent nitrite reductase complex subunit NrfF |
|---|
| Protein accession | YP_001726880 |
|---|
| Protein GI | 170021926 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
|---|
| TIGRFAM ID | [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG GACTTCTCAC GCTACTGCTG TTATTTACCT GTTTTGCGCG CGCTCAGGTC
GTAGACACCT GGCAATTCGC CAATCCGCAA CAACAGCAAC AGGCGTTAAA AATTGCCAGC
CAGTTACGTT GTCCGCAGTG CCAGAATCAA AACTTACTGG AATCCAACGC GCCGGTGGCA
GTCAGTATGC GCCATCAGGT TTACAGCATG GTGGCGGAGG GGAAGAACGA AGTCGAAATC
ATTGGCTGGA TGACCGAACG CTACGGAGAT TTTGTTCGCT ATAACCCACC GTTAACCGGT
CAGACGCTGG TGTTGTGGGC GCTGCCAGTG GTGTTGTTAC TGCTGATGGC ACTGATCCTC
TGGCGAGTGA GGGCGAAGCG ATGA
|
|---|
| Protein sequence | MNKGLLTLLL LFTCFARAQV VDTWQFANPQ QQQQALKIAS QLRCPQCQNQ NLLESNAPVA
VSMRHQVYSM VAEGKNEVEI IGWMTERYGD FVRYNPPLTG QTLVLWALPV VLLLLMALIL
WRVRAKR
|
|---|
| |