| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3931 |
|---|
| Symbol | |
|---|
| ID | 6064421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4316743 |
|---|
| End bp | 4317879 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641603344 |
|---|
| Product | phosphonate metabolism protein PhnM |
|---|
| Protein accession | YP_001726859 |
|---|
| Protein GI | 170021905 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA ATAACGTTAA GCTGGTGCTG GAAAACGAGG TGGTAAGCGG TTCGCTGGAG
GTGCAGAACG GCGAAATCCG CGCCTTTGCC GAAAGCCAGA GCCGCCTGCC GGAGGCGATG
GACGGCGAAG GCGGCTGGCT GCTGCCGGGG CTGATTGAGC TGCATACCGA TAATCTGGAT
AAATTCTTCA CCCCGCGCCC GAAAGTTGAC TGGCCTGCCC ACTCGGCGAT GAGCAGCCAC
GACGCGCTGA TGGTGGCGAG CGGCATCACC ACCGTACTGG ATGCCGTGGC AATTGGCGAC
GTGCGCGACG GCGGCGATCG GCTGGAGAAT CTGGAGAAGA TGATCAACGC CATCGAAGAG
ACACAGAAAC GCGGCGTCAA CCGCGCCGAG CACCGTCTGC ATCTGCGCTG CGAACTGCCG
CATCACACCA CGCTGCCGCT GTTTGAAAAA CTGGTGCAGC GCGAGCCGGT GACGCTGGTG
TCGCTGATGG ACCACTCGCC GGGCCAGCGC CAGTTCGCCA ACCGCGAGAA GTATCGCGAA
TATTATCAGG GCAAATACTC CCTCACTGAT GCGCAGATGC AGCAGTACGA AGAAGAGCAA
CTGGCGCTCG CCGCACGCTG GTCGCAGCCG AATCGCGAAT CCATCGCCGC CCTGTGCCGC
GCGCGAAAAA TTGCGCTTGC CAGCCACGAT GACGCCACCC ACGCCCAAGT TGCTGAATCT
CACCAGCTTG GCAGCGTGAT CGCCGAATTT CCCACCACGT TCGAAGCGGC GGAAGCCTCG
CGCAAGCATG GCATGAACGT GCTGATGGGC GCGCCGAATA TTGTGCGCGG CGGCTCGCAC
TCCGGCAACG TGGCGGCCAG TGAACTGGCG CAGCTTGGCC TGCTGGATAT CCTCTCTTCC
GACTACTACC CCGCCAGCCT GCTCGATGCG GCATTTCGCG TCGCCGATGA CGAGAGCAAC
CGCTTTACGC TGCCGCAGGC GGTGAAGCTG GTGACTAAAA ATCCAGCGCA GGCGCTTAAT
CTCCAGGATC GCGGGGTGAT TGGCGAGGGC AAACGCGCGG ACCTGGTGCT GGCGCATCGC
AAGGGCAATC ACATTCATAT CGACCACGTC TGGCGTCAGG GTAAAAGGGT GTTCTGA
|
|---|
| Protein sequence | MIINNVKLVL ENEVVSGSLE VQNGEIRAFA ESQSRLPEAM DGEGGWLLPG LIELHTDNLD
KFFTPRPKVD WPAHSAMSSH DALMVASGIT TVLDAVAIGD VRDGGDRLEN LEKMINAIEE
TQKRGVNRAE HRLHLRCELP HHTTLPLFEK LVQREPVTLV SLMDHSPGQR QFANREKYRE
YYQGKYSLTD AQMQQYEEEQ LALAARWSQP NRESIAALCR ARKIALASHD DATHAQVAES
HQLGSVIAEF PTTFEAAEAS RKHGMNVLMG APNIVRGGSH SGNVAASELA QLGLLDILSS
DYYPASLLDA AFRVADDESN RFTLPQAVKL VTKNPAQALN LQDRGVIGEG KRADLVLAHR
KGNHIHIDHV WRQGKRVF
|
|---|
| |