Gene EcolC_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3930 
Symbol 
ID6064420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4316066 
End bp4316746 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content60% 
IMG OID641603343 
Productphosphonate C-P lyase system protein PhnL 
Protein accessionYP_001726858 
Protein GI170021904 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4778] ABC-type phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02324] phosphonate C-P lyase system protein PhnL 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACG TACAAAACGT CAGTAAAACC TTCATCCTGC ACCAGCAAAA CGGCGTGCGC 
CTGCCCGTCC TCAATCGCGC CTCGCTCACC GTCAACGCGG GCGAATGCGT GGTGCTCCAC
GGCCATTCCG GCAGCGGCAA ATCAACTCTG CTACGCTCGC TGTACGCCAA CTATCTACCC
GACGAAGGTC AAATCCAGAT CAAACACGGT GACGAGTGGG TAGACCTGGT CACCGCGCCA
GCGCGCAAAG TGGTGGAAAT CCGCAAAACC ACCGTCGGCT GGGTGAGCCA GTTTCTGCGC
GTCATCCCGC GTATCTCAGC ACTGGAAGTG GTGATGCAGC CGCTGCTCGA TACCGGCGTT
CCGCGTGAAG CCTGCGCCGC TAAAGCCGCG CGTCTTCTCA CCCGCCTGAA CGTGCCGGAA
CGCCTGTGGC ACCTGGCACC ATCGACATTT TCCGGTGGCG AACAGCAGCG CGTCAACATC
GCCCGCGGCT TTATCGTCGA CTACCCCATT CTGCTGCTTG ACGAACCTAC CGCCTCGCTG
GACGCCAAAA ACAGCGCCGC GGTGGTGGAA CTGATTCGCG AAGCCAAAAC CCGTGGCGCA
GCCATCGTAG GCATCTTCCA TGACGAAGCT GTACGTAATG ACGTCGCCGA CCGCCTGCAC
CCAATGGGAG CCTCTTCATG A
 
Protein sequence
MINVQNVSKT FILHQQNGVR LPVLNRASLT VNAGECVVLH GHSGSGKSTL LRSLYANYLP 
DEGQIQIKHG DEWVDLVTAP ARKVVEIRKT TVGWVSQFLR VIPRISALEV VMQPLLDTGV
PREACAAKAA RLLTRLNVPE RLWHLAPSTF SGGEQQRVNI ARGFIVDYPI LLLDEPTASL
DAKNSAAVVE LIREAKTRGA AIVGIFHDEA VRNDVADRLH PMGASS