Gene EcolC_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3920 
Symbol 
ID6064403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4308228 
End bp4308671 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content51% 
IMG OID641603333 
Producthypothetical protein 
Protein accessionYP_001726848 
Protein GI170021894 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAA GTCCCTACCT CTCTTTTGCC GGTAACTGTT CCGACGCGAT TGCCTATTAT 
CAACGTACGT TGGGCGCGGA ACTGCTCTAT AAAATCAGCT TCGGCGAAAT GCCAAAATCA
GCGCAGGACA GCGCCGAGAA CTGCCCTTCC GGAATGCAAT TTCCCGATAC CGCCATCGCT
CATGCCAACG TGCGCATTGC CGGAAGCGAC ATCATGATGA GCGATGCCAT GCCGTCAGGA
AAAGCCAGCT ACTCCGGCTT TACGCTGGTG CTCGATTCGC AACAGGTCGA AGAAGGAAAA
CGCTGGTTTG ACAATCTTGC CGCTAACGGA AAAATCGAAA TGGCCTGGCA GGAAACTTTC
TGGGCGCATG GCTTTGGCAA AGTCACCGAT AAATTTGGCG TACCGTGGAT GATTAATGTC
GTCAAACAAC AACCAACGCA ATAA
 
Protein sequence
MPLSPYLSFA GNCSDAIAYY QRTLGAELLY KISFGEMPKS AQDSAENCPS GMQFPDTAIA 
HANVRIAGSD IMMSDAMPSG KASYSGFTLV LDSQQVEEGK RWFDNLAANG KIEMAWQETF
WAHGFGKVTD KFGVPWMINV VKQQPTQ