Gene EcolC_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3914 
Symbol 
ID6064397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4300518 
End bp4301186 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID641603328 
ProductDNA-binding transcriptional regulator BasR 
Protein accessionYP_001726843 
Protein GI170021889 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.730701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGATTGTTGA AGACGATACG CTGTTATTGC AGGGACTGAT TCTGGCGGCG 
CAAACCGAAG GCTACGCGTG CGATGGCGTG ACAACCGCGC GGATGGCGGA ACAAAGCCTT
GAGGCCGGTC ATTACAGCCT GGTGGTACTG GATTTAGGGT TACCCGACGA AGATGGACTG
CATTTTCTCG CCCGTATCCG GCAGAAAAAA TACACCCTGC CGGTACTGAT CCTCACCGCT
CGCGATACGC TGACCGACAA AATCGCCGGG CTGGATGTCG GTGCCGATGA CTATCTGGTG
AAGCCTTTTG CGCTGGAAGA GTTACACGCC CGTATCCGCG CCCTGCTACG ACGCCATAAT
AATCAGGGCG AAAGTGAGCT GATTGTTGGC AATCTGACGC TGAATATGGG TCGCCGTCAG
GTATGGATGG GCGGTGAAGA GTTGATTCTG ACGCCCAAAG AATATGCTCT GCTGTCACGG
TTAATGCTCA AAGCAGGCAG TCCGGTGCAT CGGGAAATTC TCTACAACGA CATCTATAAC
TGGGACAATG AACCCTCGAC CAACACCCTG GAAGTGCATA TCCACAATCT GCGCGACAAA
GTGGGCAAAG CCCGTATCCG CACCGTGCGC GGCTTTGGCT ATATGCTGGT CGCGAATGAG
GAAAACTAA
 
Protein sequence
MKILIVEDDT LLLQGLILAA QTEGYACDGV TTARMAEQSL EAGHYSLVVL DLGLPDEDGL 
HFLARIRQKK YTLPVLILTA RDTLTDKIAG LDVGADDYLV KPFALEELHA RIRALLRRHN
NQGESELIVG NLTLNMGRRQ VWMGGEELIL TPKEYALLSR LMLKAGSPVH REILYNDIYN
WDNEPSTNTL EVHIHNLRDK VGKARIRTVR GFGYMLVANE EN