Gene EcolC_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3912 
Symbol 
ID6064394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4297437 
End bp4298774 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID641603326 
Productarginine:agmatin antiporter 
Protein accessionYP_001726841 
Protein GI170021887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.27107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGG ATGCTGATGC TCACAAAGTG GGCTTAATCC CCGTCACCCT GATGGTGTCG 
GGGAATATTA TGGGGTCAGG TGTTTTTCTG TTACCTGCAA ACCTGGCCTC TACTGGCGGG
ATTGCCATTT ATGGATGGTT GGTGACGATT ATCGGTGCAC TGGGGCTCTC GATGGTATAC
GCCAAAATGT CGTTCCTCGA CCCAAGTCCT GGTGGTTCTT ACGCTTACGC CCGCCGCTGC
TTTGGCCCGT TTCTCGGTTA TCAAACCAAC GTCCTCTACT GGCTGGCCTG CTGGATCGGC
AATATCGCCA TGGTGGTCAT TGGCGTAGGA TATTTAAGTT ACTTCTTCCC GATTCTGAAA
GATCCATTGG TATTAACCAT CACCTGCGTC GTGGTGCTGT GGATCTTCGT CCTGCTGAAC
ATTGTCGGTC CGAAAATGAT CACCCGTGTG CAGGCAGTTG CCACCGTGCT GGCGCTGATC
CCCATCGTCG GGATTGCCGT ATTTGGCTGG TTCTGGTTCC GTGGTGAAAC CTATATGGCG
GCATGGAACG TCAGCGGCCT GGGCACCTTC GGTGCAATTC AAAGTACCCT TAACGTTACG
CTGTGGTCGT TCATCGGTGT GGAAAGTGCC TCCGTTGCCG CAGGTGTGGT GAAAAACCCG
AAACGCAATG TCCCTATCGC CACCATTGGT GGGGTATTGA TTGCCGCCGT TTGCTATGTA
CTTTCTACCA CCGCGATTAT GGGGATGATC CCTAATGCCG CACTGCGCGT TTCTGCTTCG
CCATTCGGTG ATGCCGCACG GATGGCGTTG GGTGACACCG CCGGGGCCAT TGTTTCCTTC
TGCGCAGCTG CGGGTTGCTT AGGTTCACTG GGCGGCTGGA CGTTGCTGGC GGGTCAAACG
GCGAAAGCCG CTGCCGATGA CGGACTGTTC CCACCGATCT TTGCCCGTGT AAATAAAGCG
GGTACGCCAG TGGCGGGGCT GATTATCGTC GGTATTTTGA TGACCATCTT CCAGCTCAGC
AGCATTTCAC CAAACGCGAC CAAAGAGTTC GGTCTGGTTT CTTCCGTCTC GGTCATCTTT
ACACTGGTGC CATATCTTTA CACCTGTGCG GCGTTACTGC TGCTCGGACA CGGTCACTTT
GGTAAAGCAC GCCCGGCATA TCTGGCAGTT ACTACCATTG CCTTCCTCTA CTGCATCTGG
GCCGTGGTGG GGTCCGGAGC GAAAGAGGTT ATGTGGTCAT TTGTCACCCT GATGGTCATC
ACCGCCATGT ATGCGCTGAA TTACAACCGG CTACATAAAA ACCCGTATCC CTTAGATGCA
CCAATAAGCA AAGATTAA
 
Protein sequence
MSSDADAHKV GLIPVTLMVS GNIMGSGVFL LPANLASTGG IAIYGWLVTI IGALGLSMVY 
AKMSFLDPSP GGSYAYARRC FGPFLGYQTN VLYWLACWIG NIAMVVIGVG YLSYFFPILK
DPLVLTITCV VVLWIFVLLN IVGPKMITRV QAVATVLALI PIVGIAVFGW FWFRGETYMA
AWNVSGLGTF GAIQSTLNVT LWSFIGVESA SVAAGVVKNP KRNVPIATIG GVLIAAVCYV
LSTTAIMGMI PNAALRVSAS PFGDAARMAL GDTAGAIVSF CAAAGCLGSL GGWTLLAGQT
AKAAADDGLF PPIFARVNKA GTPVAGLIIV GILMTIFQLS SISPNATKEF GLVSSVSVIF
TLVPYLYTCA ALLLLGHGHF GKARPAYLAV TTIAFLYCIW AVVGSGAKEV MWSFVTLMVI
TAMYALNYNR LHKNPYPLDA PISKD