Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3910 |
Symbol | |
ID | 6064388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4293944 |
End bp | 4296214 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641603324 |
Product | arginine decarboxylase |
Protein accession | YP_001726839 |
Protein GI | 170021885 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.143171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG TATTAATTGT TGAAAGCGAG TTTCTCCATC AAGACACCTG GGTCGGTAAC GCCGTTGAGC GTCTGGCAGA TGCTTTAAGC CAGCAAAACG TTACCGTGAT TAAATCCACC TCCTTTGATG ATGGTTTTGC CATTCTCTCT TCAAACGAAG CCATTGACTG CCTGATGTTC AGCTATCAAA TGGAACATCC GGACGAACAT CAAAACGTCA GACAATTGAT CGGTAAGCTT CATGAGCGCC AACAAAACGT GCCGGTCTTC CTGTTGGGCG ATCGGGAAAA AGCCCTCGCC GCAATGGATC GCGACCTGCT GGAGCTTGTC GATGAATTCG CCTGGATTCT GGAAGATACC GCCGACTTTA TCGCCGGACG CGCCGTTGCC GCGATGACCC GCTACCGCCA GCAGCTGTTG CCGCCACTGT TCAGCGCGCT GATGAAATAT AGTGACATCC ATGAATATTC CTGGGCAGCG CCAGGCCACC AGGGCGGCGT TGGTTTTACC AAAACACCCG CCGGACGTTT CTACCATGAC TACTATGGTG AAAATCTGTT CCGCACCGAC ATGGGCATCG AACGAACTTC CCTCGGTTCT TTGCTTGACC ATACTGGCGC ATTTGGCGAA AGCGAAAAAT ATGCCGCACG CGTATTTGGT GCCGATCGCT CCTGGTCGGT AGTCGTCGGT ACTTCCGGCT CTAACCGCAC CATCATGCAG GCTTGCATGA CCGATAACGA TGTCGTGGTC GTTGACCGTA ATTGCCATAA ATCCATCGAA CAAGGCTTGA TGCTGACAGG CGCGAAACCG GTCTATATGG TGCCAAGCCG CAACCGCTAC GGCATTATCG GGCCAATCTA TCCGCAGGAA ATGCAACCTG AATCCTTGCA GAAGAAAATC AGTGAAAGCC CGCTGACTAA AGACAAAGCC GGGCAAAAAC CGTCTTACTG CGTGGTGACC AACTGCACCT ATGACGGCGT GTGTTATAAC GCTAAAGAAG CGCAGGATCT GCTGGAAAAA ACCTCCGATC GTCTGCACTT TGACGAAGCC TGGTACGGCT ATGCACGTTT CAACCCGATC TATGCCGATC ACTATGCCAT GCGCGGCGAA CCTGGCGATC ACAACGGTCC TACCGTTTTC GCCACCCACT CCACCCACAA ACTGCTGAAT GCGCTTTCAC AGGCTTCTTA TATTCATGTA CGTGAAGGTC GTGGGGCGAT TAACTTCTCC CGCTTCAACC AGGCCTACAT GATGCATGCC ACCACCTCCC CGCTGTATGC CATCTGCGCA TCCAACGACG TGGCGGTGTC GATGATGGAC GGCAACAGCG GCCTGTCACT GACGCAGGAA GTGATCGACG AAGCGGTTGA TTTCCGTCAG GCGATGGCGC GGCTGTATAA AGAGTTCACC GCTGACGGTA GCTGGTTCTT CAAACCGTGG AACAAAGAAG TCGTCACCGA CCCACAAACC GGCAAAACCT ATGACTTTGC TGACGCACCA ACCAAACTGC TGACCACCGT TCAGGACTGC TGGGTAATGC ATCCGGGCGA AAGCTGGCAC GGCTTCAAAG ATATTCCGGA TAACTGGAGT ATGCTCGACC CGATTAAAGT CAGCATCCTT GCTCCGGGAA TGGGTGAAGA TGGTGAACTG GAAGAAACCG GTGTTCCGGC GGCGCTGGTC ACTGCCTGGC TTGGTCGCCA CGGCATTGTG CCTACCCGCA CCACTGACTT CCAAATTATG TTCCTGTTCT CTATGGGCGT AACCCGTGGG AAATGGGGGA CTCTGGTTAA CACCCTTTGC TCCTTCAAAC GCCACTATGA CGCCAACACA CCGCTGGCGC AGGTGATGCC GGAACTTGTT GAACAATATC CTGACACTTA TGCGAACATG GGGATTCACG ATCTGGGTGA CACCATGTTT GCCTGGCTGA AAGAAAACAA CCCTGGCGCA CGGTTGAACG AAGCCTATTC CGGCCTGCCG GTGGCGGAAA TCACCCCGCG TGAAGCGTAC AACGCGATTG TCGACAACAA TGTCGAACTG GTATCCATTG AAAATCTGCC AGGACGTATC GCGGCAAACT CAGTTATCCC GTATCCGCCA GGAATCCCGA TGCTGCTGTC TGGTGAAAAC TTCGGCGATA AAAACAGTCC GCAAGTAAGT TATTTACGCT CGCTGCAATC CTGGGATCAT CATTTCCCTG GATTTGAACA CGAAACTGAA GGGACTGAAA TTATTGACGG TATTTACCAC GTTATGTGTG TGAAAGCGTA A
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Protein sequence | MMKVLIVESE FLHQDTWVGN AVERLADALS QQNVTVIKST SFDDGFAILS SNEAIDCLMF SYQMEHPDEH QNVRQLIGKL HERQQNVPVF LLGDREKALA AMDRDLLELV DEFAWILEDT ADFIAGRAVA AMTRYRQQLL PPLFSALMKY SDIHEYSWAA PGHQGGVGFT KTPAGRFYHD YYGENLFRTD MGIERTSLGS LLDHTGAFGE SEKYAARVFG ADRSWSVVVG TSGSNRTIMQ ACMTDNDVVV VDRNCHKSIE QGLMLTGAKP VYMVPSRNRY GIIGPIYPQE MQPESLQKKI SESPLTKDKA GQKPSYCVVT NCTYDGVCYN AKEAQDLLEK TSDRLHFDEA WYGYARFNPI YADHYAMRGE PGDHNGPTVF ATHSTHKLLN ALSQASYIHV REGRGAINFS RFNQAYMMHA TTSPLYAICA SNDVAVSMMD GNSGLSLTQE VIDEAVDFRQ AMARLYKEFT ADGSWFFKPW NKEVVTDPQT GKTYDFADAP TKLLTTVQDC WVMHPGESWH GFKDIPDNWS MLDPIKVSIL APGMGEDGEL EETGVPAALV TAWLGRHGIV PTRTTDFQIM FLFSMGVTRG KWGTLVNTLC SFKRHYDANT PLAQVMPELV EQYPDTYANM GIHDLGDTMF AWLKENNPGA RLNEAYSGLP VAEITPREAY NAIVDNNVEL VSIENLPGRI AANSVIPYPP GIPMLLSGEN FGDKNSPQVS YLRSLQSWDH HFPGFEHETE GTEIIDGIYH VMCVKA
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