Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3903 |
Symbol | |
ID | 6064378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4284433 |
End bp | 4285152 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641603317 |
Product | DNA-binding transcriptional activator DcuR |
Protein accession | YP_001726832 |
Protein GI | 170021878 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.71711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATG TATTAATTAT CGATGACGAC GCAATGGTCG CGGAGCTGAA TCGCCGATAC GTAGCACAAA TCCCAGGCTT TCAATGCTGT GGAACAGCCT CGACGCTGGA GAAAGCCAAA GAGATTATCT TCAATAGCGA TACGCCTATC GACCTGATAT TGCTCGATAT CTATATGCAA AAAGAGAACG GGCTCGATTT ACTGCCTGTC CTGCATAACG CGCGTTGCAA AAGTGATGTG ATTGTCATCT CCTCCGCAGC CGATGCGGCA ACCATTAAAG ATTCGCTGCA TTACGGTGTC GTGGATTACC TGATCAAACC CTTCCAGGCT TCCCGCTTTG AAGAGGCGCT CACCGGCTGG CGGCAAAAGA AAATGGCGCT GGAAAAACAT CAGTATTATG ACCAGGCCGA GCTTGATCAG CTAATCCACG GCAGCAGCTC CAACGAACAG GATCCTCGTC GCTTGCCAAA AGGCTTAACG CCGCAGACGT TACGCACGCT GTGCCAGTGG ATTGACGCGC ATCAGGACTA TGAGTTTTCA ACCGACGAGC TAGCCAACGA GGTTAACATT TCGCGTGTTT CCTGCCGTAA ATACCTCATC TGGCTGGTCA ACTGCCACAT CTTGTTCACC AGTATCCATT ATGGCGTCAC GGGGCGTCCA GTTTACCGTT ACCGTATTCA GGCAGAACAC TACTCACTAC TGAAACAATA TTGCCAATAA
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Protein sequence | MINVLIIDDD AMVAELNRRY VAQIPGFQCC GTASTLEKAK EIIFNSDTPI DLILLDIYMQ KENGLDLLPV LHNARCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA SRFEEALTGW RQKKMALEKH QYYDQAELDQ LIHGSSSNEQ DPRRLPKGLT PQTLRTLCQW IDAHQDYEFS TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRIQAEH YSLLKQYCQ
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