Gene EcolC_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3893 
Symbol 
ID6064363 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4271543 
End bp4272240 
Gene Length698 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID641603307 
Productinsertion element protein 
Protein accessionYP_001726822 
Protein GI170021868 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCTG TTTCTATCAG CTGTCCCTCC TGTTCAGCTA CTGACGGGGT GGTGCGTAAC 
GGCAAAAGCA CTGCCGGACA TCAGCGCTAT CTCTGCTCTC ACTGCCGTAA AACATGGAAA
CTGCAGTTCA CTTACACCGC TTCTCAACCC GGTACGCACC AGAAAATCAT TGATATGGCC
ATGAATGGCG TTGGATGCCG GGCAACCGCC CGCATTATGG GCGTTGGCCT CAACACGATT
TTCCGCCATT TAAAAAACTC AGGCCGCAGT CGGTAACCTC GCGCATACAG CCGGGCAGTG
ACGTCATCGT CTGCGCGGAA ATGGACGAAC AGTGGGGCTA CGTCGGTGCT AAATCACGTC
AGCGCTGGCT GTTTTACGCG TATGACAGGA TACGGAGGAC AGTTGTGGCG CACGTTTTCG
GTGAACGCAC TCTGGCCACA CTGGAGCGTC TTCTGAGCCT GCTGTCGGCC TTTGAGGTCG
TGGTATGGAT GACGGATGGC TGGCCGCTGT ATGAATCACG CCTGAAGGGA AAGCTGCACG
TTATCAGCAA GCGTTACACT CAGCGCATTG AGCGACATAA TCTGAATCTG AGACAACATC
TGGCAAGGCT GGGACGGAAG TCGCTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAGG
TCATCGGGCA TTATCTGAAC ATAAAACACT ATCAGTAA
 
Protein sequence
MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWK LQFTYTASQP GTHQKIIDMA 
MNGVGCRATA RIMGVGLNTI FRHLKKLRPQ SVTSRIQPGS DVIVCAEMDE QWGYVGAKSR
QRWLFYAYDR IRRTVVAHVF GERTLATLER LLSLLSAFEV VVWMTDGWPL YESRLKGKLH
VISKRYTQRI ERHNLNLRQH LARLGRKSLS FSKSVELHDK VIGHYLNIKH YQ