Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3893 |
Symbol | |
ID | 6064363 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4271543 |
End bp | 4272240 |
Gene Length | 698 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641603307 |
Product | insertion element protein |
Protein accession | YP_001726822 |
Protein GI | 170021868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTCTG TTTCTATCAG CTGTCCCTCC TGTTCAGCTA CTGACGGGGT GGTGCGTAAC GGCAAAAGCA CTGCCGGACA TCAGCGCTAT CTCTGCTCTC ACTGCCGTAA AACATGGAAA CTGCAGTTCA CTTACACCGC TTCTCAACCC GGTACGCACC AGAAAATCAT TGATATGGCC ATGAATGGCG TTGGATGCCG GGCAACCGCC CGCATTATGG GCGTTGGCCT CAACACGATT TTCCGCCATT TAAAAAACTC AGGCCGCAGT CGGTAACCTC GCGCATACAG CCGGGCAGTG ACGTCATCGT CTGCGCGGAA ATGGACGAAC AGTGGGGCTA CGTCGGTGCT AAATCACGTC AGCGCTGGCT GTTTTACGCG TATGACAGGA TACGGAGGAC AGTTGTGGCG CACGTTTTCG GTGAACGCAC TCTGGCCACA CTGGAGCGTC TTCTGAGCCT GCTGTCGGCC TTTGAGGTCG TGGTATGGAT GACGGATGGC TGGCCGCTGT ATGAATCACG CCTGAAGGGA AAGCTGCACG TTATCAGCAA GCGTTACACT CAGCGCATTG AGCGACATAA TCTGAATCTG AGACAACATC TGGCAAGGCT GGGACGGAAG TCGCTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAGG TCATCGGGCA TTATCTGAAC ATAAAACACT ATCAGTAA
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Protein sequence | MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWK LQFTYTASQP GTHQKIIDMA MNGVGCRATA RIMGVGLNTI FRHLKKLRPQ SVTSRIQPGS DVIVCAEMDE QWGYVGAKSR QRWLFYAYDR IRRTVVAHVF GERTLATLER LLSLLSAFEV VVWMTDGWPL YESRLKGKLH VISKRYTQRI ERHNLNLRQH LARLGRKSLS FSKSVELHDK VIGHYLNIKH YQ
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