| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3882 |
|---|
| Symbol | |
|---|
| ID | 6064344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4239557 |
|---|
| End bp | 4241671 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641603296 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001726811 |
|---|
| Protein GI | 170021857 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.229228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC AAACGCCCAA GGTGGCACTT TCTGATGGTT TTCTGGGCGC ATTCGCGCGG
ATCCCAAAAG CACAGCAAAA AAAGGTGCAG GAATTCATCT CCAAATTCCG TCAGGACCCG
ACCAGTAATG GACTTAACTA TGAAAAGATC CACGATGCGC GCAGTAAAAA TGTCCATTCG
GTGCGAATCG ATCAAACTTA TCGCGGCATT GTTCTGAAAC CTGAACAGGG TGCCCTGTAT
ATGCTGATGT GGGTGGATAA ACACGACGAA GCATACGACT GGGCGCGGCG GCATGATTGT
TCAATTCACC CGGTTACTGG CGCGATTCAG GTCATTGATA TTAGCTATAT CAAACCGGCA
GCGGAAACGG TGGTTGATAA ACCGAAACTC TTCGCAGCTT ACAGCGCGGA ACAGATTCTG
GCCCTGGGCG TGCCGCCTGT CTTTATTGAT CAGGTGATGG CGCTTACCGA TGAAGCCGGG
CTTAATCAAC TTGAAAGCAT AATGCCAGCA GAAGCCTGGG AACCTCTGCA CTGGCTGGCA
GAAGGGCTGG ATTACCAGGA AGTGCTGGAA GAGTTTAACG ATCATCGTGA TGAGCCTGTT
GATACCAACG ACTTTATGGA GGCGATTGAA CGAAGTAAAC GTCGCTTCCA TGTCGTTGAA
AATGAACAGG AGCTGTTGCA GATGCTTAAT GCGCCTTTAG AAAAATGGCG TGTATTTCTG
CATCCGAGCC AGCGAAAACT GGTGGAGTCG CCCGCTAATG GTCCGGTACG AGTACTGGGC
GGTGCAGGTA CAGGGAAAAC GGTTGTTGCG ATGCACCGTG CGCGGTGGTT ATCTCAGCGT
CTGGCAGATA AACCCGGTAA GAAGGTACTT TTCACGACCT TTACGCGTAA CCTGGCGGCA
GATATTCGCG CTAATCTCCA GCGGTTGTGT ACGCGAGAAG AGATGGCGCG TATTGACGTC
GTTAACATTG ATGCCTGGAT GAGCGACCAA CTAAAACGCC ACGGTTATGA TTTCCGCGTG
GTATACGACA GCGATGAAGG GCGACGCAAA TGCTGGAACT ATGCCTTGCA GCAGGCACCT
GCCGAACTGG GGCTACCTGA CAATTTCTAT GCTGAAGAGT GGCAACGCGT TGTCCAGCCA
AATGCGGTTT ACACCCGGGA GGAATACCTC AAAGTCAGCC GGGTTGGACG TGGTACAGCG
TTATCCCGTA TTCAACGGGC GAAAATCTGG CCAGTCTTTG AAGAATTCAG AGCACAAATG
GCGCGTGCCA AACTGCGCGA AATGGGCGAT GCCATGCATG AGGCTATTGT TCTGTTTAAA
GAAAAACAGG TTCAACTACC TTATAGCAGT ATTGTGGTCG ATGAAGCTCA AGATATCGGT
GCCCCGGCAT TTACTCTTAT TCGCAGCCTG GTTCCCGAGT CGCCCAACGA TCTGTTTATT
GTCGGGGATG GGCATCAGCG TATTTATCGC AATAAGGTCG TTCTTGGTCA GTGTGGTATT
AACGTCCGTG GTCGTCGCAG TAAAAAATTG AAGATTAACT ATCGGACCAC AGAAGAGACG
CGTCAATTTG CTGTTGGGCT GTTAACTGGT GTGAAGGTTG ATAACCTCGA TGGCGAAGCG
GATACCAGTA ATGATTATTT GTCATTACTG CACGGGGAAA AGCCCATGAT TACGCATGCG
GCAGATTTCA AAGAAGAGGC TGCAACGCTC GTCAAGCAAA TTCAGGCATT GCTGGCGAAT
CAGGTTCGTT CTCAGGATAT CTGCATTACT GCGCGTACTA AACATGCTTG TGACCGCTAC
GCATCAGCAC TGAATGACGC CGGAATTGAG ACATTTAATT TAGGCAATGA TAGCGGTGAC
AGCGATGCAC GCCCAGGCGT GCGAGTTGCA ACGATGCACC GTATTAAAGG GCTTGAGTTC
CAGTATGTGT TCCTGGTGGG GATTAACGAA GGCGTTGTGC CGGAAATAAA AGCATTAGCA
TCCGATGATC CCGTTGAACA GCGTGATGCA TTATTTAATG AGCGCGCGTT ACTGCATGTG
GCTGCAACCC GTGCCGTAAA AGGGCTGTTT GTTTCATCAT CTGGTATCCC TAGTCCGCTA
TTAGTGGCTG ATTGA
|
|---|
| Protein sequence | MTVQTPKVAL SDGFLGAFAR IPKAQQKKVQ EFISKFRQDP TSNGLNYEKI HDARSKNVHS
VRIDQTYRGI VLKPEQGALY MLMWVDKHDE AYDWARRHDC SIHPVTGAIQ VIDISYIKPA
AETVVDKPKL FAAYSAEQIL ALGVPPVFID QVMALTDEAG LNQLESIMPA EAWEPLHWLA
EGLDYQEVLE EFNDHRDEPV DTNDFMEAIE RSKRRFHVVE NEQELLQMLN APLEKWRVFL
HPSQRKLVES PANGPVRVLG GAGTGKTVVA MHRARWLSQR LADKPGKKVL FTTFTRNLAA
DIRANLQRLC TREEMARIDV VNIDAWMSDQ LKRHGYDFRV VYDSDEGRRK CWNYALQQAP
AELGLPDNFY AEEWQRVVQP NAVYTREEYL KVSRVGRGTA LSRIQRAKIW PVFEEFRAQM
ARAKLREMGD AMHEAIVLFK EKQVQLPYSS IVVDEAQDIG APAFTLIRSL VPESPNDLFI
VGDGHQRIYR NKVVLGQCGI NVRGRRSKKL KINYRTTEET RQFAVGLLTG VKVDNLDGEA
DTSNDYLSLL HGEKPMITHA ADFKEEAATL VKQIQALLAN QVRSQDICIT ARTKHACDRY
ASALNDAGIE TFNLGNDSGD SDARPGVRVA TMHRIKGLEF QYVFLVGINE GVVPEIKALA
SDDPVEQRDA LFNERALLHV AATRAVKGLF VSSSGIPSPL LVAD
|
|---|
| |