| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3874 |
|---|
| Symbol | |
|---|
| ID | 6064614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4230301 |
|---|
| End bp | 4231602 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641603289 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_001726805 |
|---|
| Protein GI | 170021851 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGTTG TAGAACTCAT CATAGTTTTG CTGGCGATCT TCTTGGGCGC CAGATTGGGG
GGAATAGGTA TTGGTTTTGC AGGCGGATTG GGGGTGCTGG TTCTTGCCGC TATTGGCGTT
AAACCCGGTA ACATCCCGTT CGATGTCATC TCCATTATCA TGGCGGTTAT CGCCGCTATT
TCTGCCATGC AGGTTGCTGG CGGTCTGGAC TATCTGGTTC ATCAGACAGA AAAGCTGCTG
CGCCGTAACC CGAAATACAT CACGATCCTC GCACCGATCG TGACCTATTT CCTGACTATC
TTTGCTGGTA CTGGCAACAT CTCTCTGGCG ACACTGCCAG TTATCGCTGA AGTTGCGAAG
GAACAAGGCG TTAAACCTTG CCGTCCGCTG TCTACTGCAG TGGTATCCGC GCAGATTGCG
ATCACCGCAT CGCCAATCTC AGCGGCAGTG GTTTACATGT CTTCCGTGAT GGAAGGTCAT
GGCATCAGCT ACCTCCATCT GCTCTCCGTG GTCATCCCGT CCACCCTGCT GGCGGTTCTG
GTGATGTCCT TCCTGGTCAC TATGCTGTTC AACTCCAAAC TCTCTGACGA TCCGATTTAT
CGCAAGCGTC TGGAAGAGGG CCTGGTTGAA CTGCGCGGTG AAAAGCAGAT TGAAATCAAA
TCCGGTGCAA AAACGTCCGT CTGGCTGTTC CTGCTGGGCG TAGTTGGCGT GGTTATCTAT
GCAATCATCA ACAGCCCAAG CATGGGTCTG GTTGAAAAAC CGCTGATGAA CACCACCAAC
GCAATCCTGA TCATCATGCT CAGCGTTGCA ACTCTGACCA CCGTTATCTG TAAAGTCGAT
ACCGACAACA TCCTCAACTC CAGCACCTTC AAAGCAGGTA TGAGCGCCTG TATTTGTATC
CTGGGTGTTG CGTGGCTGGG CGATACTTTC GTTTCCAACA ACATCGACTG GATCAAAGAT
ACCGCTGGTG AAGTGATTCA GGGTCATCCG TGGCTGCTGG CCGTCATCTT CTTCTTTGCT
TCTGCTCTGC TGTACTCTCA GGCTGCAACC GCAAAAGCAC TGATGCCGAT GGCTCTGGCA
CTGAACGTTT CACCGCTGAC CGCTGTTGCT TCTTTCGCTG CGGTGTCTGG TCTGTTCATT
CTGCCGACCT ACCCGACGCT GGTTGCTGCG GTACAGATGG ATGACACGGG TACTACCCGT
ATCGGTAAAT TCGTCTTCAA CCATCCGTTC TTCATCCCGG GTACTCTGGG TGTTGCCCTG
GCCGTTTGCT TCGGCTTCGT GCTGGGTAGC TTCATGCTGT AA
|
|---|
| Protein sequence | MLVVELIIVL LAIFLGARLG GIGIGFAGGL GVLVLAAIGV KPGNIPFDVI SIIMAVIAAI
SAMQVAGGLD YLVHQTEKLL RRNPKYITIL APIVTYFLTI FAGTGNISLA TLPVIAEVAK
EQGVKPCRPL STAVVSAQIA ITASPISAAV VYMSSVMEGH GISYLHLLSV VIPSTLLAVL
VMSFLVTMLF NSKLSDDPIY RKRLEEGLVE LRGEKQIEIK SGAKTSVWLF LLGVVGVVIY
AIINSPSMGL VEKPLMNTTN AILIIMLSVA TLTTVICKVD TDNILNSSTF KAGMSACICI
LGVAWLGDTF VSNNIDWIKD TAGEVIQGHP WLLAVIFFFA SALLYSQAAT AKALMPMALA
LNVSPLTAVA SFAAVSGLFI LPTYPTLVAA VQMDDTGTTR IGKFVFNHPF FIPGTLGVAL
AVCFGFVLGS FML
|
|---|
| |