| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3860 |
|---|
| Symbol | ampC |
|---|
| ID | 6067598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4218132 |
|---|
| End bp | 4219265 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641603275 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001726791 |
|---|
| Protein GI | 170021837 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.027383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA CGACGCTCTG CGCCTTATTA ATTACCGCCT CTTGCTCCAC ATTTGCTGCC
CCCCAAAAAA TCAACGATAT TGTGCATCGC ACAATTACCC CGCTTATAGA GCAACAAAAG
ATCCCCGGTA TGGCGGTGGC GGTAATTTAT CAGGGTAAAC CTTATTACTT TACCTGGGGC
TATGCGGACA TCGCCAAAAA GCAGCCCGTC ACACAGCAAA CGTTGTTTGA GTTAGGTTCG
GTCAGCAAAA CATTTACGGG CGTGCTTGGT GGCGACGCTA TTGCTCGAGG GGAAATCAAG
TTAAGCGATC CCGCAACAAA ATACTGGCCT GAACTTACCG CTAAACAGTG GAATGGGATC
ACACTATTAC ATCTCGCAAC CTACACTGCT GGCGGCCTGC CATTGCAGGT GCCGGATGAA
GTGAAATCCT CAAGCGACTT GCTGCGCTTC TATCAAAACT GGCAGCCTGC ATGGGCTCCA
GGAACACAAC GTCTGTATGC CAACTCCAGT ATCGGTTTGT TCGGCGCACT GGCTGTGAAG
CCGTCTGGTT TGAGTTTTGA GCAGGCGATG CAAACTCGTG TCTTCCAGCC ACTCAAACTC
AACCATACAT GGATTAATGT ACCGCCCGCA GAAGAAAAGA ATTACGCCTG GGGATATCGC
GAAGGTAAGG CAGTGCATGT TTCGCCAGGG GCGTTAGATG CTGAAGCTTA TGGTGTGAAG
TCGACCATTG AAGATATGGC CCGCTGGGTG CAAATCAATT TAAAACCCCT TGATATCAAT
GAGAAAACGC TTCAACAAGG GATACAAGTG GCACAATCTC GCTACTGGCA AACCGGCGAT
ATGTATCAGG GTCTGGGCTG GGAAATGCTG GACTGGCCGG TAAATCCTGA CATCATCGTT
AACGGCAGTG ACAATAAAAT TGCACTGGCA GCACGCCCCG TAAAAGCGAT TACGCCCCCA
ACTCCTGCAG TACGCGCATC ATGGGTACAT AAAACAGGGG CGACCGGCGG ATTTGGTAGC
TATGTCGCGT TTATTCCAGA AAAAGAGCTG GGTATCGTGA TGCTGGCTAA CAAAAACTAT
CCCAATCCAG CGAGAGTCGC CGCCGCCTGG CAGATTCTCA ACGCTCTGCA GTAA
|
|---|
| Protein sequence | MFKTTLCALL ITASCSTFAA PQKINDIVHR TITPLIEQQK IPGMAVAVIY QGKPYYFTWG
YADIAKKQPV TQQTLFELGS VSKTFTGVLG GDAIARGEIK LSDPATKYWP ELTAKQWNGI
TLLHLATYTA GGLPLQVPDE VKSSSDLLRF YQNWQPAWAP GTQRLYANSS IGLFGALAVK
PSGLSFEQAM QTRVFQPLKL NHTWINVPPA EEKNYAWGYR EGKAVHVSPG ALDAEAYGVK
STIEDMARWV QINLKPLDIN EKTLQQGIQV AQSRYWQTGD MYQGLGWEML DWPVNPDIIV
NGSDNKIALA ARPVKAITPP TPAVRASWVH KTGATGGFGS YVAFIPEKEL GIVMLANKNY
PNPARVAAAW QILNALQ
|
|---|
| |