| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3855 |
|---|
| Symbol | |
|---|
| ID | 6067544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4213456 |
|---|
| End bp | 4214433 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641603270 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_001726786 |
|---|
| Protein GI | 170021832 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00133285 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA CGGCATCCTG GCAGCCGAGC GCATCCATTC CTAACTTATT AAAACGCGCG
GCGATTATGG CGGAGATCCG TCGTTTCTTT GCCGATCGTG GAGTGCTGGA GGTGGAGACG
CCTTGTATGA GCCAGGCGAC GGTAACCGAT ATTCATTTGG TCCCGTTTGA GACACGTTTC
GTTGGCCCCG GGCATTCGCA GGGGATGAAT CTCTGGTTAA TGACCAGCCC GGAATACCAT
ATGAAACGCC TGCTGGTTGC CGGTTGTGGG CCGGTATTCC AGCTGTGCCG CAGTTTCCGT
AATGAAGAGA TGGGGCGTTA TCACAACCCT GAGTTCACTA TGCTGGAGTG GTATCGACCG
CACTATGATA TGTACCGGTT GATGAACGAG GTGGACGATC TCTTACAACA GGTGCTGGAC
TGCCCTGCAG CAGAAAGCCT TTCTTATCAA CAAGCTTTCT TGCGTTATCT GGAAATTGAC
CCACTCTCTG CCGACAAAAC GCAACTGCGG GAAGTGGCAG CGAAACTGGA TTTGAGCAAT
GTTGCTGATA CCGAAGAAGA CCGCGACACG TTGCTACAAT TGCTGTTTAC CTTTGGCGTA
GAGCCAAATA TTGGTAAAGA AAAACCGACC TTTGTGTACC ACTTTCCAGC CAGCCAGGCA
TCACTGGCGC AAATCAGTAC CGAAGATCAT CGGGTCGCTG AACGCTTTGA GGTTTATTAT
AAAGGTATTG AGCTGGCGAA TGGTTTCCAT GAATTGACGG ATGCCCGTGA GCAGCAACAA
CGCTTTGAAC AAGATAACCG TAAGCGCGCG GCGCGCGGTT TGCCGCAGCA CCCCATTGAC
CAGAATCTGA TTGACGCCTT GAAAGTCGGT ATGCCTGACT GTTCCGGCGT GGCATTAGGT
GTTGATCGTC TGGTGATGTT GGCGCTGGGC GCGGAGACAC TGGCTGAAGT CATCGCCTTT
AGCGTTGACC GGGCATAA
|
|---|
| Protein sequence | MSETASWQPS ASIPNLLKRA AIMAEIRRFF ADRGVLEVET PCMSQATVTD IHLVPFETRF
VGPGHSQGMN LWLMTSPEYH MKRLLVAGCG PVFQLCRSFR NEEMGRYHNP EFTMLEWYRP
HYDMYRLMNE VDDLLQQVLD CPAAESLSYQ QAFLRYLEID PLSADKTQLR EVAAKLDLSN
VADTEEDRDT LLQLLFTFGV EPNIGKEKPT FVYHFPASQA SLAQISTEDH RVAERFEVYY
KGIELANGFH ELTDAREQQQ RFEQDNRKRA ARGLPQHPID QNLIDALKVG MPDCSGVALG
VDRLVMLALG AETLAEVIAF SVDRA
|
|---|
| |