Gene EcolC_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3835 
Symbol 
ID6066284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4190461 
End bp4190886 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID641603247 
Producttranscriptional repressor NsrR 
Protein accessionYP_001726766 
Protein GI170021812 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.678572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000129464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGTTAA CGAGTTTCAC TGATTACGGA TTACGTGCGC TGATCTACAT GGCGTCATTG 
CCAGAAGGGC GGATGACCAG TATTTCTGAA GTGACTGACG TCTACGGCGT CTCCCGTAAT
CATATGGTCA AAATAATCAA TCAACTTAGT CGTGCCGGCT ACGTGACTGC TGTTCGTGGA
AAAAATGGCG GCATTCGCCT GGGTAAATCG GCGAGTGCGA TACGTATTGG TGATGTGGTG
CGCGAGCTGG AGCCCTTATC GCTGGTGAAT TGCAGCAGTG AGTTTTGCCA CATTACACCT
GCCTGTCGGT TGAAACAGGC GCTTTCTAAG GCCGTGCAAA GTTTTCTTAC GGAACTGGAT
AACTACACGC TTGCCGATTT GGTTGAAGAG AATCAACCGC TTTATAAATT ATTGCTGGTG
GAGTGA
 
Protein sequence
MQLTSFTDYG LRALIYMASL PEGRMTSISE VTDVYGVSRN HMVKIINQLS RAGYVTAVRG 
KNGGIRLGKS ASAIRIGDVV RELEPLSLVN CSSEFCHITP ACRLKQALSK AVQSFLTELD
NYTLADLVEE NQPLYKLLLV E