Gene EcolC_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3833 
Symbol 
ID6065899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4187070 
End bp4187801 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID641603245 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_001726764 
Protein GI170021810 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000869352 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAA TGATTTACGG CATCCACGCA GTGCAGGCCC TGCTGGAGCG CGCCCCTGAA 
CGTTTTCAGG AAGTCTTTAT TTTAAAAGGC CGTGAAGATA AACGTCTGTT ACCGCTGATT
CACGCCCTTG AGTCTCAGGG CGTGGTTATC CAGTTGGCAA ACCGCCAATA TCTCGACGAG
AAAAGCGACG GTGCCGTGCA TCAGGGCATT ATCGCCCGCG TGAAGCCAGG ACGTCAGTAT
CAGGAAAACG ATCTGCCGGA TCTGATCGCT TCGCTCGATC AACCGTTCCT GCTGATCCTC
GACGGTGTAA CCGATCCGCA CAACCTCGGC GCGTGCCTGC GTAGCGCGGA CGCTGCTGGC
GTTCACGCGG TGATTGTGCC GAAAGATCGC TCCGCACAGC TCAACGCTAC GGCGAAAAAA
GTAGCCTGCG GCGCGGCAGA AAGCGTTCCA CTGATTCGGG TGACTAACCT TGCGCGCACC
ATGCGTATGT TGCAGGAAGA GAATATCTGG ATCGTCGGTA CGGCAGGCGA GGCGGATCAT
ACACTCTATC AGAGCAAAAT GACCGGACGC CTGGCGCTGG TGATGGGCGC GGAAGGTGAA
GGTATGCGTC GCCTGACCCG TGAACATTGC GATGAGTTGA TCAGCATCCC AATGGCAGGA
AGTGTTTCTT CCCTGAACGT TTCGGTTGCA ACCGGAATTT GCTTATTTGA AGCGGTTCGT
CAGCGCAGCT AG
 
Protein sequence
MSEMIYGIHA VQALLERAPE RFQEVFILKG REDKRLLPLI HALESQGVVI QLANRQYLDE 
KSDGAVHQGI IARVKPGRQY QENDLPDLIA SLDQPFLLIL DGVTDPHNLG ACLRSADAAG
VHAVIVPKDR SAQLNATAKK VACGAAESVP LIRVTNLART MRMLQEENIW IVGTAGEADH
TLYQSKMTGR LALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGICLFEAVR
QRS