Gene EcolC_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3827 
Symbol 
ID6065187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4182885 
End bp4184048 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content53% 
IMG OID641603239 
Productglutathionylspermidine synthase 
Protein accessionYP_001726758 
Protein GI170021804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000494371 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAGAC ACAACGTTCC TGTGCGACGG GATCTGGACC AGATCGCCGC TGACAACGGT 
TTCGACTTTC ATATCATCGA CAATGAAATC TATTGGGATG AGAGTCGGGC TTACCGTTTT
ACTCTGCGCC AGATTGAAGA GCAGATCGAA AAACCGACTG CGGAACTGCA TCAGATGTGC
CTTGAGGTGG TGGATCGCGC GGTAAAAGAT GAAGAGATCC TGACGCAACT GGCGATCCCG
CCGTTGTACT GGGATGTGAT CGCTGAAAGC TGGCGCGCCC GCGATCCTTC GCTGTATGGA
CGGATGGATT TTGCCTGGTG TGGCAATGCG CCGGTGAAGC TGCTGGAGTA CAACGCCGAT
ACGCCAACTT CATTGTACGA GTCGGCTTAT TTCCAGTGGC TGTGGCTGGA GGATGCCCGG
CGCAGCGGCA TTATTCCGCG TGATGCCGAT CAGTACAATG CTATTCAGGA ACGCCTGATT
TCACGCTTTA GCGAGCTTTA CAGTCGGGAA CCGTTTTATT TTTGCTGCTG TCAGGACACC
GATGAAGACA GGAGTACCGT GCTGTACTTG CAGGACTGCG CCCAGCAGGC AGGGCAGGAG
TCGCGGTTTA TCTACATTGA AGATCTCGGT TTGGGCGTCG GCGGCGTACT GACCGATCTT
GATGATAATG TCATCCAGCG TGCATTTAAG CTGTATCCGC TGGAGTGGAT GATGCGTGAC
GATAACGGTC CGCTGCTGCG CAAGCGTCGC GAGCAATGGG TGGAGCCGTT ATGGAAAAGT
ATCTTGAGTA ATAAAGGGCT AATGCCGCTG CTTTGGCGCT TCTTCCCTGG TCATCCTAAC
CTTCTTGCAT CCTGGTTTGA GGGTGAAAAA TCGCAGATTG CCGCTGGCGA AAGCTATGTG
CGTAAACCGC TCTACTCGCG CGAAGGCGGA AATGTCACCA TTTTCGACGG CCAGAATAAC
GTCGTTGACC ACGCTGATGG TGATTACGCC GATGAACCGA TGATCTACCA GGCGTTTCAA
CCTCTGCCGC GGTTTGGCGA TAGCTACACA CTCATCGGTA GCTGGATTGT CGATGATGAA
GCGTGCGGAA TGGGGATCCG TGAAGATAAC ACACTGATCA CCAAAGACAC CTCACGTTTC
GTTCCGCATT ACATTGCTGG ATAA
 
Protein sequence
MLRHNVPVRR DLDQIAADNG FDFHIIDNEI YWDESRAYRF TLRQIEEQIE KPTAELHQMC 
LEVVDRAVKD EEILTQLAIP PLYWDVIAES WRARDPSLYG RMDFAWCGNA PVKLLEYNAD
TPTSLYESAY FQWLWLEDAR RSGIIPRDAD QYNAIQERLI SRFSELYSRE PFYFCCCQDT
DEDRSTVLYL QDCAQQAGQE SRFIYIEDLG LGVGGVLTDL DDNVIQRAFK LYPLEWMMRD
DNGPLLRKRR EQWVEPLWKS ILSNKGLMPL LWRFFPGHPN LLASWFEGEK SQIAAGESYV
RKPLYSREGG NVTIFDGQNN VVDHADGDYA DEPMIYQAFQ PLPRFGDSYT LIGSWIVDDE
ACGMGIREDN TLITKDTSRF VPHYIAG