Gene EcolC_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3822 
Symbol 
ID6065387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4178623 
End bp4179378 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID641603234 
Producttranscriptional repressor UlaR 
Protein accessionYP_001726753 
Protein GI170021799 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000654343 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAG CACAAAGACA TCAAATCCTC CTGGAAATGC TCGCACAATT GGGCTTTGTG 
ACCGTTGAGA AAGTCGTTGA GCGTCTGGGA ATTTCGCCTG CCACTGCGCG ACGCGATATC
AATAAACTTG ACGAAAGCGG CAAACTGAAA AAAGTGCGCA ATGGCGCAGA AGCTATTACC
CAACAGCGCC CGCGCTGGAC GCCGATGAAT CTGCATCAGG CGCAGAATCA CGATGAAAAA
GTACGTATCG CTAAAGCGGC CTCGCAGCTG GTTAATCCGG GCGAAAGCGT AGTCATCAAC
TGCGGCTCCA CCGCGTTTCT ACTTGGGCGG GAAATGTGTG GCAAGCCAGT GCAAATCATC
ACTAATTATC TACCGCTGGC AAATTACCTG ATCGATCAAG AACATGACAG CGTGATCATT
ATGGGCGGAC AGTACAACAA AAGTCAGTCC ATCACTTTAA GCCCGCAGGG CAGCGAAAAC
AGTCTCTATG CCGGGCACTG GATGTTTACC AGCGGCAAAG GACTGACAGC AGAAGGGTTG
TATAAAACCG ATATGCTGAC GGCAATGGCA GAGCAGAAGA TGCTGAGCGT GGTAGGGAAA
CTGGTGGTAC TGGTTGATAG CAGTAAGATT GGCGAACGCG CGGGAATGCT TTTTAGCCGT
GCCGATCAAA TTGATATGCT GATCACCGGC AAAAATGCTA ACCCGGAAAT CCTGCAACAA
CTGGAAGCGC AAGGGGTCAG CATTCTGCGT GTTTAA
 
Protein sequence
MTEAQRHQIL LEMLAQLGFV TVEKVVERLG ISPATARRDI NKLDESGKLK KVRNGAEAIT 
QQRPRWTPMN LHQAQNHDEK VRIAKAASQL VNPGESVVIN CGSTAFLLGR EMCGKPVQII
TNYLPLANYL IDQEHDSVII MGGQYNKSQS ITLSPQGSEN SLYAGHWMFT SGKGLTAEGL
YKTDMLTAMA EQKMLSVVGK LVVLVDSSKI GERAGMLFSR ADQIDMLITG KNANPEILQQ
LEAQGVSILR V