Gene EcolC_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3819 
Symbol 
ID6064716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4175378 
End bp4175683 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content51% 
IMG OID641603231 
ProductPTS system L-ascorbate-specific transporter subunit IIB 
Protein accessionYP_001726750 
Protein GI170021796 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00492888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTAC GTATTCTGGC TGTGTGTGGC AACGGACAAG GCAGTTCCAT GATCATGAAG 
ATGAAAGTGG ACCAGTTTTT AACCCAATCA AACATTGACC ACACGGTAAA TAGCTGCGCG
GTTGGCGAAT ACAAAAGCGA GTTGAGCGGC GCGGATATCA TCATCGCTTC TACGCACATT
GCGGGCGAAA TCACCGTGAC CGGCAACAAA TACGTGGTTG GCGTGCGCAA CATGCTCTCT
CCTGCCGATT TTGGCCCGAA ACTGCTGGAA GTGATCAAAG CGCATTTCCC GCAGGACGTG
AAGTAA
 
Protein sequence
MTVRILAVCG NGQGSSMIMK MKVDQFLTQS NIDHTVNSCA VGEYKSELSG ADIIIASTHI 
AGEITVTGNK YVVGVRNMLS PADFGPKLLE VIKAHFPQDV K