Gene EcolC_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3802 
Symbol 
ID6067343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4161484 
End bp4162275 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID641603215 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001726734 
Protein GI170021780 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.031131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.662147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA CTCGTCCTGT TGCCGTGATT ACCGGAGCCG CTCGTGGTAT TGGAAAGGGC 
TGTGCGCTGG AGCTTGCTCG TGGCGGATTT AACCTGCTGA TTAACGATCT TCCCGATGCC
GACAGCGTAG AAAAACTGCA TATCACACAA CAAGAATGTA TAGCTGAAGG CGTGGAAGTG
ATTTGCTTCC CTGCCGATGT CGGCGATCTC TCCTTGCATG AAGAGATGCT CGACGCGGCG
CAAAACCTGT GGGGACGTCT GGACTGCCTG CTCAACAACG CAGGCATTTC AGTGAAAAAA
CGCGGTGACC TCCTCGACCT CGAACCAGAC AGCTTCGATC AAAACATTGC CATTAACACC
CGCGCGCCGT TCTTCCTTGC TCAGGCATTC AGTAAGCGTT TACTGGCACA GCCGAAACCG
GAAGCGGAAC TGCCGCACCG CTCGATTATT TTCGTCAGTT CCATCAACGC CATCATGCTG
GCGATGAATC GCGGCGAATA CACCATTGCC AAAACCGCCG TTTCTGCCGC TGCTCGTCTA
TTTGCAGCTC GCCTTTGTAA TGAACAAATT GGCGTTTATG AAGTGCGCCC AGGTCTCATC
AAAACTGATA TGACTATTCC GGCAACGGCT TATTACGACG AACTGATTGC CAAAGGTCTG
GTGCCGTGGG GACGTTGGGG TTATCCGGCT GATATTGCTT CCACTGTCCG CGCGATGGCG
GAAGGTAAAC TGATTTACAC CTGTGGTCAG GCGGTCGCCA TCGACGGCGG CTTAAGTATG
CCGCGCTTCT GA
 
Protein sequence
MKSTRPVAVI TGAARGIGKG CALELARGGF NLLINDLPDA DSVEKLHITQ QECIAEGVEV 
ICFPADVGDL SLHEEMLDAA QNLWGRLDCL LNNAGISVKK RGDLLDLEPD SFDQNIAINT
RAPFFLAQAF SKRLLAQPKP EAELPHRSII FVSSINAIML AMNRGEYTIA KTAVSAAARL
FAARLCNEQI GVYEVRPGLI KTDMTIPATA YYDELIAKGL VPWGRWGYPA DIASTVRAMA
EGKLIYTCGQ AVAIDGGLSM PRF