| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3787 |
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| Symbol | |
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| ID | 6066462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4145845 |
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| End bp | 4147578 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641603200 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001726719 |
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| Protein GI | 170021765 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.718556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCTATA TCCGACAGTT ATGCTGTGTA AGCTTACTCT GCTTAAGCGG ATCTGCCGTC
GCCGCGAACG TCCGTCTACA GGTCGAGGGG TTATCGGGAC AGCTGGAAAA GAACGTTCGT
GCGCAGCTTT CTACGATTGA AAGTGATGAA GTGACGCCAG ACCGTCGCTT TCGCGCACGC
GTCGATGATG CCATCCGCGA AGGTCTGAAA GCGCTGGGTT ATTACCAGCC GACCATTGAA
TTTGATCTCC GTCCACCGCC AAAGAAAGGG CGGCAGGTAT TGATCGCCAA AGTCACGCCA
GGCGTGCCGG TGTTAATTGG CGGCACCGAT GTGGTATTGC GCGGCGGCGC GCGGACCGAT
AAAGACTATT TGAAATTGCT CGATACTCGC CCGGCTATTG GCACGGTGCT GAACCAGGGC
GATTATGAAA ATTTCAAAAA GTCCTTAACC AGCATTGCGT TGCGTAAAGG TTATTTCGAT
AGCGAATTTA CCAAAGCGCA GCTGGGCATT GCGCTCGGCC TGCATAAAGC CTTCTGGGAT
ATTGATTATA ACAGTGGCGA ACGTTACCGC TTTGGGCATG TGACCTTTGA AGGATCACAA
ATCCGCGATG AATACCTGCA AAATCTGGTG CCGTTTAAAG AGGGCGATGA GTACGAATCG
AAAGATCTGG CGGAACTGAA CCGCCGACTT TCTGCTACCG GCTGGTTTAA CTCGGTGGTG
GTGGCTCCAC AATTTGATAA AGCGCGCGAA ACGAAAGTAT TACCATTGAC GGGCGTGGTT
TCGCCGCGAA CAGAAAACAC CATCGAAACC GGGGTCGGTT ACTCTACGGA CGTGGGACCG
CGCGTGAAAG CGACGTGGAA AAAACCGTGG ATGAACTCAT ACGGTCACAG TCTGACCACC
AGTACCAGTA TTTCCGCGCC GGAACAGATC CTCGACTTCA GCTATAAAAT GCCGCTGCTG
AAGAATCCAC TGGAACAATA TTATTTGGTG CAGGGCGGTT TTAAGCGCAC TGACCTGAAC
GATACCGAAT CTGACTCCAC TACGCTGGTG GCTTCTCGCT ACTGGGATCT CTCCAGCGGC
TGGCAGCGTG CCATTAACCT GCGCTGGAGT CTCGACCACT TTACCCAGGG TGAAATTACC
AACACCACGA TGCTGTTTTA TCCTGGGGTG ATGATTAGCC GCACGCGTTC TCGTGGTGGC
CTGATGCCAA CCTGGGACGA CTCGCAACGC TACTCTATCG ACTACTCCAA CACTGCCTGG
GGCTCAGATG TCGATTTCTC CGTTTTCCAG GCACAAAACG TCTGGATCCG CACACTGTAC
GATCGCCATC GTTTTGTGAC ACGCGGCACG CTGGGCTGGA TTGAAACCGG TGATTTCGAC
AAAGTACCGC CGGATCTGCG TTTTTTCGCC GGGGGCGACC GCAGTATTCG TGGCTACAAA
TACAAATCTA TCGCTCCGAA ATACGCCAAC GGTGACCTGA AAGGGGCCTC GAAGTTGATA
ACCGGATCGC TGGAGTACCA GTACAACGTG ACCGGAAAAT GGTGGGGCGC GGTGTTTGTC
GATAGTGGCG AAGCGGTAAG CGATATTCGC CGCAGCGACT TTAAAACCGG TACCGGGGTC
GGCGTACGCT GGGAATCGCC GGTCGGGCCA ATCAAACTCG ATTTTGCCGT ACCGGTCGCG
GATAAAGACG AACACGGGTT ACAGTTTTAC ATCGGTCTGG GGCCAGAATT ATGA
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| Protein sequence | MRYIRQLCCV SLLCLSGSAV AANVRLQVEG LSGQLEKNVR AQLSTIESDE VTPDRRFRAR
VDDAIREGLK ALGYYQPTIE FDLRPPPKKG RQVLIAKVTP GVPVLIGGTD VVLRGGARTD
KDYLKLLDTR PAIGTVLNQG DYENFKKSLT SIALRKGYFD SEFTKAQLGI ALGLHKAFWD
IDYNSGERYR FGHVTFEGSQ IRDEYLQNLV PFKEGDEYES KDLAELNRRL SATGWFNSVV
VAPQFDKARE TKVLPLTGVV SPRTENTIET GVGYSTDVGP RVKATWKKPW MNSYGHSLTT
STSISAPEQI LDFSYKMPLL KNPLEQYYLV QGGFKRTDLN DTESDSTTLV ASRYWDLSSG
WQRAINLRWS LDHFTQGEIT NTTMLFYPGV MISRTRSRGG LMPTWDDSQR YSIDYSNTAW
GSDVDFSVFQ AQNVWIRTLY DRHRFVTRGT LGWIETGDFD KVPPDLRFFA GGDRSIRGYK
YKSIAPKYAN GDLKGASKLI TGSLEYQYNV TGKWWGAVFV DSGEAVSDIR RSDFKTGTGV
GVRWESPVGP IKLDFAVPVA DKDEHGLQFY IGLGPEL
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