| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3781 |
|---|
| Symbol | |
|---|
| ID | 6067637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4136871 |
|---|
| End bp | 4137893 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641603194 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001726713 |
|---|
| Protein GI | 170021759 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAAT CTCTCCCGGA CACTACGCCG CCGAAAAGGC GCTTTCGCTG GCCAACGGGA
ATGCCGCAGC TGGCGGCACT GTTGCTGGTG CTGCTGGTCG ATAGCCTGGT GGCCCCGCAT
TTCTGGCAGG TGGTGCTCCA GGATGGGCGT TTATTCGGTA GCCCCATAGA CATTCTTAAC
CGTGCGGCCC CCGTTGCGCT GTTGGCTATC GGAATGACGC TGGTGATCGC AACAGGTGGG
ATTGATCTCT CCGTGGGGGC GGTGATGGCT ATCGCCGGAG CCACAACGGC TGCGATGACG
GTCGCGGGAT TCAGCCTGCC GATTGTTTTG TTAAGCGCCC TGGGCACTGG CATCCTGGCG
GGATTGTGGA ACGGCATACT GGTAGCGATC CTCAAAATTC AGCCGTTTGT TGCCACCCTG
ATCCTGATGG TCGCCGGGCG CGGCGTGGCG CAACTGATCA CCTCCGGACA GATCGTCACG
TTTAACTCGC CGGATCTCTC ATGGTTTGGC AGTGGATCGC TGTTGTTCCT GCCAACGCCG
GTCATTATCG CGGTGCTGAC GCTTATCCTG TTCTGGCTGT TGACCCGCAA AACGGCGCTG
GGGATGTTTA TCGAAGCCGT TGGTATCAAC ATTCGGGCGG CAAAAAATGC CGGGGTAAAC
ACGCGGATCA TCGTCATGCT TACCTACGTG TTGAGCGGGC TGTGTGCGGC GATTGCGGGC
ATTATCGTGG CGGCGGATAT TCGCGGTGCC GATGCCAATA ACGCCGGGTT ATGGCTGGAG
CTGGACGCCA TTCTCGCGGT GGTTATTGGC GGCGGATCGC TGATGGGCGG ACGTTTTAAC
CTACTGCTTT CGGTGGTGGG GGCGCTGATT ATTCAGGGGA TGAACACCGG AATTTTGCTT
TCGGGCTTTC CGCCAGAGAT GAACCAGGTT GTAAAAGCGG TGGTGGTTCT TTGCGTGCTG
ATTGTCCAGT CGCAACGCTT TATCAGTCTG ATTAAAGGAG TACGTAGCCG TGATAAAACG
TAA
|
|---|
| Protein sequence | MPQSLPDTTP PKRRFRWPTG MPQLAALLLV LLVDSLVAPH FWQVVLQDGR LFGSPIDILN
RAAPVALLAI GMTLVIATGG IDLSVGAVMA IAGATTAAMT VAGFSLPIVL LSALGTGILA
GLWNGILVAI LKIQPFVATL ILMVAGRGVA QLITSGQIVT FNSPDLSWFG SGSLLFLPTP
VIIAVLTLIL FWLLTRKTAL GMFIEAVGIN IRAAKNAGVN TRIIVMLTYV LSGLCAAIAG
IIVAADIRGA DANNAGLWLE LDAILAVVIG GGSLMGGRFN LLLSVVGALI IQGMNTGILL
SGFPPEMNQV VKAVVVLCVL IVQSQRFISL IKGVRSRDKT
|
|---|
| |