| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3762 |
|---|
| Symbol | |
|---|
| ID | 6068128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4115851 |
|---|
| End bp | 4116444 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641603175 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001726694 |
|---|
| Protein GI | 170021740 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.676263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACTA AAAAACAATC TCGCGTTCCA GGTCGTCCCA GACGTTTCGC TCCTGAGCAG
GCAATCTCTG CGGCAAAAGT GCTTTTTCAC CAAAAAGGTT TCGATGCTGT CAGTGTTGCT
GAAGTTACTG ATTATCTTGG TATTAACCCC CCGAGCCTCT ACGCGGCTTT TGGCAGTAAA
GCTGGGTTAT TTAGCCGTGT ACTCAATGAA TACGTCGGTA CGGAAGCTAT TCCGCTTGCC
GATATTCTTC GTGATGATCG TCCAGTAGGC GAGTGCCTGG TTGAGGTATT AAAAGAAGCG
GCGCGCAGAT ATAGCCAAAA CGGCGGCTGC GCTGGCTGTA TGGTTCTTGA AGGTATTCAT
AGTCATGATC CACTAGCGCG TGATATTGCC GTTCAATATT ATCACGCCGC AGAAACGACC
ATTTATGACT ATATCGCCAG GCGGCATCCA CAAAGCGCAC AATGTGTGAC TGATTTTATG
AGTACCGTGA TGTCAGGGCT TTCTGCGAAG GCACGGGAGG GGCACTCAAT CGAACAACTC
TGTGCAACAG CTGCACTGGC GGGGGAAGCG ATAAAAACTC TTCTCAAGGA GTGA
|
|---|
| Protein sequence | MVTKKQSRVP GRPRRFAPEQ AISAAKVLFH QKGFDAVSVA EVTDYLGINP PSLYAAFGSK
AGLFSRVLNE YVGTEAIPLA DILRDDRPVG ECLVEVLKEA ARRYSQNGGC AGCMVLEGIH
SHDPLARDIA VQYYHAAETT IYDYIARRHP QSAQCVTDFM STVMSGLSAK AREGHSIEQL
CATAALAGEA IKTLLKE
|
|---|
| |