Gene EcolC_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3750 
Symbol 
ID6068645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4102282 
End bp4103364 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID641603165 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001726684 
Protein GI170021730 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000963246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTT TTGGCGTACT TGACCGCTAT ATCGGTAAAA CTATTTTCAC CACCATCATG 
ATGACGCTGT TCATGCTGGT GTCGCTGTCG GGCATTATCA AGTTTGTCGA TCAGCTGAAA
AAAGCCGGGC AGGGGAGTTA CGACGCGTTA GGCGCAGGAA TGTATACCTT GCTGAGCGTG
CCGAAAGATG TGCAAATCTT CTTCCCGATG GCGGCTCTGC TTGGGGCGTT GCTTGGTCTT
GGGATGCTGG CGCAGCGCAG CGAACTGGTG GTGATGCAGG CTTCTGGTTT TACCCGTATG
CAGGTGGCGC TGTCGGTGAT GAAAACCGCC ATTCCGCTGG TCTTACTGAC GATGGCGATT
GGTGAATGGG TCGCGCCGCA GGGCGAGCAG ATGGCGCGTA ACTACCGTGC GCAGGCGATG
TACGGCGGCT CGTTGCTCTC TACCCAGCAA GGCTTATGGG CGAAAGATGG CAACAACTTC
GTCTACATTG AGCGGGTTAA AGGTGACGAA GAGTTAGGTG GCATCAGCAT TTATGCCTTT
AACGAGAATC GTCGTCTGCA ATCCGTACGC TATGCCGCTA CCGCGAAGTT TGACCCGGAA
CATAAAGTCT GGCGTCTGTC GCAGGTGGAT GAATCTGATC TGACCAATCC GAAACAGATC
ACCGGTTCGC AGACGGTGAG CGGTACCTGG AAAACCAACC TCACGCCAGA CAAACTGGGC
GTGGTGGCGC TGGACCCGGA TGCACTCTCC ATTAGCGGTT TGCACAACTA TGTGAAGTAT
CTGAAGTCGA GCGGTCAGGA TGCCGGACGT TATCAGCTCA ACATGTGGAG CAAAATCTTC
CAGCCGCTAT CCGTGGCGGT GATGATGCTG ATGGCGCTGT CGTTCATCTT TGGCCCACTG
CGTAGCGTAC CGATGGGCGT GCGTGTGGTC ACCGGTATCA GCTTCGGTTT TGTCTTCTAC
GTACTGGACC AGATCTTCGG CCCGCTGACG TTGGTTTATG GCATCCCGCC GATCATCGGC
GCACTGTTGC CAAGCGCCAG CTTCTTCTTA ATCAGCCTGT GGCTGTTAAT GAGAAAATCG
TAA
 
Protein sequence
MQPFGVLDRY IGKTIFTTIM MTLFMLVSLS GIIKFVDQLK KAGQGSYDAL GAGMYTLLSV 
PKDVQIFFPM AALLGALLGL GMLAQRSELV VMQASGFTRM QVALSVMKTA IPLVLLTMAI
GEWVAPQGEQ MARNYRAQAM YGGSLLSTQQ GLWAKDGNNF VYIERVKGDE ELGGISIYAF
NENRRLQSVR YAATAKFDPE HKVWRLSQVD ESDLTNPKQI TGSQTVSGTW KTNLTPDKLG
VVALDPDALS ISGLHNYVKY LKSSGQDAGR YQLNMWSKIF QPLSVAVMML MALSFIFGPL
RSVPMGVRVV TGISFGFVFY VLDQIFGPLT LVYGIPPIIG ALLPSASFFL ISLWLLMRKS