Gene EcolC_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3683 
Symbol 
ID6066735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4033652 
End bp4034329 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID641603098 
Productnucleotidase 
Protein accessionYP_001726621 
Protein GI170021667 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.847444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000163133 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTGGG ACTGGATTTT CTTTGATGCC GATGAAACGC TGTTTACCTT TGACTCATTC 
ACCGGCCTGC AGCGGATGTT TCTTGATTAC AGCGTCACCT TTACCGCTGA AGATTTTCAG
GACTATCAGG CCGTTAACAA GCCTCTGTGG ATGGATTATC AAAACGGCGC GATCACTTCA
TTACAGCTTC AGCACGGGCG TTTCGAGAGC TGGGCCGAAC GGCTGAACGT CGAGCCGGGT
AAACTCAACG AAGCCTTTAT TAATGCGATG GCGGAAATCT GCACGCCGCT GCCGGGCGCG
GTTTCTCTGC TTAACGCCAT TCGTGGCAAC GCCAAAATCG GCATCATCAC CAACGGCTTT
AGTGCCTTGC AACAGGTGCG TCTGGAACGC ACGGGCCTGC GTGATTACTT CGATTTGCTG
GTGATTTCCG AAGAAGTTGG CGTTGCCAAA CCGAATAAGA AAATTTTCGA TTATGCGCTG
GAACAGGCGG GCAATCCTGA CCGTTCACGC GTGCTGATGG TTGGCGACAC TGCCGAGTCC
GATATTCTCG GTGGCATCAA CGCCGGGCTT GCGACCTGCT GGCTGAATGC GCACAATCGC
GAGCAACCAG AAGGCATCGC GCCCACCTGG ACCGTTTCTT CGTTGCACGA ACTGGAGCAG
CTCCTGTGTA AACACTGA
 
Protein sequence
MKWDWIFFDA DETLFTFDSF TGLQRMFLDY SVTFTAEDFQ DYQAVNKPLW MDYQNGAITS 
LQLQHGRFES WAERLNVEPG KLNEAFINAM AEICTPLPGA VSLLNAIRGN AKIGIITNGF
SALQQVRLER TGLRDYFDLL VISEEVGVAK PNKKIFDYAL EQAGNPDRSR VLMVGDTAES
DILGGINAGL ATCWLNAHNR EQPEGIAPTW TVSSLHELEQ LLCKH