| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3676 |
|---|
| Symbol | |
|---|
| ID | 6065963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4025810 |
|---|
| End bp | 4027360 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641603091 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001726614 |
|---|
| Protein GI | 170021660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0063204 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTT CTGATGAAAA TGCACTGCAA CAACGTTGCC AGCAAATTGT CACCAGCCCA
GTGCTTAGCC CGGAGCAGAA GCGCCATTTT CTGGCACTTG AAGCAGAAAA CAATCTGCCT
TATCCGCAGC TGCCTGCCGA AGCCCGCCGT GCGCTGGATG AGGGTGTAAT CTGCGATATG
TTTGAAGGTC ATGCGCCGTA CAAACCGCGC TATGTCTTAC CCGATTACGC CCGTTTTCTG
GCGAACGGTT CCGAATGGCT GGAGCTGGAA GGCGCGAAAG ATCTTGATGA CGCACTCTCT
CTGCTGACCA TTCTTTACCA CCACGTACCG TCGGTCACAT CGATGCCGGT CTACCTGGGG
CAACTGGATG CGTTGTTGCA ACCGTATGTT AGAATTCTAA CACAAGACGA GATCGATATT
CGAATAAAAC GTTTCTGGCG TTACCTCGAC AGAACCCTGC CAGACGCCTT TATGCACGCC
AATATCGGCC CGTCTGATTC GCCCATTACC CGTGCAATCT TACGTGCAGA CGCAGAGTTG
AAGCAGGTTT CACCGAACCT GACCTTTATC TACGATCCTG AAATCACCCC TGATGACCTA
CTGCTGGAAG TGGCGAAGAA CATCTGTGAA TGTAGCAAAC CGCACATCGC CAACGGTCCG
GTGCATGATA AAATTTTCAC AAAAGGGGGC TACGGGATTG TGAGCTGTTA CAACTCACTG
CCGCTGGCGG GTGGTGGCAG CACGCTGGTA CGCCTTAACC TGAAAGCCAT TGCCGAGCGC
AGCGAATCGC TGGATGACTT CTTTACGCGC ACTCTACCGC ACTACTGCCA GCAGCAGATC
GCCATCATCG ATGCGCGGTG TGAATTCCTC TATCAACAAT CACACTTCTT TGAGAATAGC
TTCCTGGTGA AAGAAGGGCT GATTAACCCT GAACGTTTTG TGCCAATGTT TGGCATGTAT
GGGCTGGCGG AAGCGGTTAA CTTGCTGTGT GAGAAAGAAG GGATTGCCGC GCGCTACGGT
AAAGAAGCCG CCGCAAATGA AGTGGGTTAT CGCATCAGCG CGCAACTGGC GGAGTTTGTC
GCCAATACCC CCGTGAAATA TGGCTGGCAA AAACGCGCCA TGTTACACGC ACAGTCGGGG
ATCAGTTCCG ATATCGGCAC CACGCCGGGC GCGCGTTTAC CCTATGGCGA TGAGCCAGAT
CCGATCACCC ATCTGCAAAC TGTCGCCCCG CATCATGCTT ATTATTATTC CGGCATCAGC
GACATTCTGA CGCTCGACGA AACCATCAAA CGTAATCCGC AGGCGCTGGT ACAGCTTTGC
CTCGGTGCCT TTAAAGCCGG AATGCGTGAA TTTACCGCCA ATGTCAGCGG TAACGATCTG
GTTCGCGTTA CCGGTTATAT GGTGCGTTTG TCGGATTTAG AAAAATATCG CGCCGAAGGT
TCACGCACCA ACACCACCTG GCTGGGCGAA GAAGCCGCAC GCAACACTCG TATTCTGGAA
CGCCAGCCGC GCGTGATAAG CCATGAACAG CAGATGCGCT TTAGTCAGTA A
|
|---|
| Protein sequence | MPTSDENALQ QRCQQIVTSP VLSPEQKRHF LALEAENNLP YPQLPAEARR ALDEGVICDM
FEGHAPYKPR YVLPDYARFL ANGSEWLELE GAKDLDDALS LLTILYHHVP SVTSMPVYLG
QLDALLQPYV RILTQDEIDI RIKRFWRYLD RTLPDAFMHA NIGPSDSPIT RAILRADAEL
KQVSPNLTFI YDPEITPDDL LLEVAKNICE CSKPHIANGP VHDKIFTKGG YGIVSCYNSL
PLAGGGSTLV RLNLKAIAER SESLDDFFTR TLPHYCQQQI AIIDARCEFL YQQSHFFENS
FLVKEGLINP ERFVPMFGMY GLAEAVNLLC EKEGIAARYG KEAAANEVGY RISAQLAEFV
ANTPVKYGWQ KRAMLHAQSG ISSDIGTTPG ARLPYGDEPD PITHLQTVAP HHAYYYSGIS
DILTLDETIK RNPQALVQLC LGAFKAGMRE FTANVSGNDL VRVTGYMVRL SDLEKYRAEG
SRTNTTWLGE EAARNTRILE RQPRVISHEQ QMRFSQ
|
|---|
| |