Gene EcolC_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3669 
Symbol 
ID6065271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4019107 
End bp4019751 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID641603084 
Producthypothetical protein 
Protein accessionYP_001726607 
Protein GI170021653 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.891572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.615913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCA CAAAACTGAA ATTCCGGCTG CATCGGGCAG TGATTGTCCT GTTCTGTCTT 
GCCTTGTTAG TGGCGCTGAT GCAGGGAGCG TCATGGTTTA GTCAAAACCA CCAGCGACAA
CGTAATCCAC AGCTGGAAGA ACTGGCCCGC ACCCTGGCGC GTCAGGTAAC GCTGAACGTT
GCACCGCTGA TGCGTACCGA CTCGCCGGAT GAAAAACGCA TTCAGGCGAT CCTCGATCAG
TTAACGGATG AAAGCCGTAT CCTCGACGCG GGCGTGTATG ACGAACAAGG CGATCTTATC
GCCCGTTCTG GCGAAAGCGT CGAAGTGCGC GACCGGCTGG CGCTCGACGG TAAAAAAGCG
GGCGGCTATT TTAACCAGCA GATTGTCGAA CCAATTGCCG GGAAAAACGG ACCGCTCGGC
TATCTGCGCC TGACGCTCGA CACCCATACG CTCGCCACCG AAGCCCAACA GGTGGATAAC
ACCACTAACA TTTTACGCCT GATGTTGCTG CTTTCACTGG CAATCGGCGT AGTGCTGACC
CGCACGCTGC TACAGGGTAA ACGTACCCGC TGGCAGCAAT CGCCCTTCCT GTTAACCGCC
AGCAAACCGG TGCCGGAAGA GGAAGAAAGC GAGAAAAAAG AGTGA
 
Protein sequence
MARTKLKFRL HRAVIVLFCL ALLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNV 
APLMRTDSPD EKRIQAILDQ LTDESRILDA GVYDEQGDLI ARSGESVEVR DRLALDGKKA
GGYFNQQIVE PIAGKNGPLG YLRLTLDTHT LATEAQQVDN TTNILRLMLL LSLAIGVVLT
RTLLQGKRTR WQQSPFLLTA SKPVPEEEES EKKE