| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3655 |
|---|
| Symbol | |
|---|
| ID | 6065456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4003646 |
|---|
| End bp | 4004362 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641603070 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_001726593 |
|---|
| Protein GI | 170021639 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.115907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC CGCACATTCT TATCGTTGAA GACGAGTTGG TAACACGCAA CACGTTGAAA
AGTATTTTCG AAGCGGAAGG CTATGATGTT TTCGAAGCGA CAGATGGCGC GGAAATGCAT
CAGATCCTCT CTGAATATGA CATCAACCTG GTGATCATGG ATATCAATCT GCCGGGTAAG
AACGGTCTTC TGTTAGCGCG TGAACTGCGC GAGCAGGCGA ATGTTGCGTT GATGTTCCTG
ACTGGCCGTG ACAACGAAGT CGATAAAATT CTCGGCCTCG AAATCGGTGC AGATGACTAC
ATCACCAAAC CGTTCAACCC GCGTGAACTG ACGATTCGTG CACGCAACCT GCTGTCCCGT
ACCATGAATC TGGGTACTGT CAGCGAAGAA CGTCGTAGCG TTGAAAGCTA CAAGTTCAAT
GGTTGGGAAC TGGACATCAA CAGCCGTTCG TTGATCGGCC CTGATGGCGA GCAGTACAAG
CTGCCGCGCA GCGAGTTCCG CGCCATGCTT CACTTCTGTG AAAACCCAGG CAAAATTCAG
TCTCGTGCTG AACTGCTGAA GAAAATGACC GGCCGTGAGC TGAAACCGCA CGACCGTACT
GTAGACGTGA CGATCCGCCG TATTCGTAAA CATTTCGAAT CTACGCCGGA TACGCCGGAA
ATCATCGCCA CCATTCACGG TGAAGGTTAT CGCTTCTGCG GTGATCTGGA AGATTAA
|
|---|
| Protein sequence | MQTPHILIVE DELVTRNTLK SIFEAEGYDV FEATDGAEMH QILSEYDINL VIMDINLPGK
NGLLLARELR EQANVALMFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLSR
TMNLGTVSEE RRSVESYKFN GWELDINSRS LIGPDGEQYK LPRSEFRAML HFCENPGKIQ
SRAELLKKMT GRELKPHDRT VDVTIRRIRK HFESTPDTPE IIATIHGEGY RFCGDLED
|
|---|
| |