Gene EcolC_3647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3647 
Symbol 
ID6066215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3993110 
End bp3994063 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID641603062 
Producttransaldolase B 
Protein accessionYP_001726585 
Protein GI170021631 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA AATTGACCTC CCTTCGTCAG TACACCACCG TAGTGGCCGA CACTGGGGAC 
ATCGCGGCAA TGAAGCTGTA TCAACCGCAG GATGCCACAA CCAACCCTTC TCTCATTCTT
AACGCAGCGC AGATTCCGGA ATACCGTAAG TTGATTGATG ATGCTGTCGC CTGGGCGAAA
CAGCAGAGCA ACGATCGCGC GCAGCAGATC GTGGACGCGA CCGACAAACT GGCAGTAAAT
ATTGGTCTGG AAATCCTGAA ACTGGTTCCG GGCCGTATCT CAACTGAAGT TGATGCGCGT
CTTTCCTATG ACACCGAAGC GTCAATTGCG AAAGCAAAAC GCCTGATCAA ACTCTACAAC
GATGCTGGTA TTAGCAACGA TCGTATTCTG ATCAAACTGG CTTCTACCTG GCAGGGTATC
CGTGCTGCAG AACAGCTGGA AAAAGAAGGC ATCAACTGTA ACCTGACCCT GCTGTTCTCC
TTCGCTCAGG CTCGTGCTTG TGCGGAAGCA GGCGTGTTCC TGATCTCGCC ATTTGTTGGC
CGTATTCTTG ACTGGTACAA AGCGAATACT GATAAGAAAG AGTACGCTCC GGCAGAAGAT
CCGGGCGTGG TTTCTGTATC TGAAATCTAC CAGTACTACA AAGAGCACGG TTATGAAACC
GTGGTTATGG GCGCAAGCTT CCGTAACATC GGCGAAATTC TGGAACTGGC AGGCTGCGAC
CGTCTTACCA TCGCACCTAC ACTGCTGAAA GAGCTGGCTG AGAGCGAAGG GGCTATCGAA
CGTAAACTGT CTTACACCGG CGAAGTGAAA GCGCGTCCGG CGCGTATCAC TGAGTCCGAG
TTCCTGTGGC AGCACAACCA GGATCCAATG GCAGTAGATA AACTGGCGGA AGGTATCCGT
AAGTTTGCTA TTGACCAGGA AAAACTGGAA AAAATGATCG GCGATCTGCT GTAA
 
Protein sequence
MTDKLTSLRQ YTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDDAVAWAK 
QQSNDRAQQI VDATDKLAVN IGLEILKLVP GRISTEVDAR LSYDTEASIA KAKRLIKLYN
DAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RILDWYKANT DKKEYAPAED PGVVSVSEIY QYYKEHGYET VVMGASFRNI GEILELAGCD
RLTIAPTLLK ELAESEGAIE RKLSYTGEVK ARPARITESE FLWQHNQDPM AVDKLAEGIR
KFAIDQEKLE KMIGDLL