| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3642 |
|---|
| Symbol | dnaK |
|---|
| ID | 6064767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3988222 |
|---|
| End bp | 3990138 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641603057 |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_001726580 |
|---|
| Protein GI | 170021626 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.297376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAA TAATTGGTAT CGACCTGGGT ACTACCAACT CTTGTGTAGC GATTATGGAT
GGCACCACTC CTCGCGTGCT GGAGAACGCC GAAGGCGATC GCACCACGCC TTCTATCATT
GCCTATACCC AGGATGGTGA AACTCTGGTT GGTCAGCCGG CTAAACGTCA GGCAGTGACA
AACCCGCAAA ACACCCTGTT TGCGATTAAA CGCCTGATTG GCCGCCGCTT CCAGGACGAA
GAAGTACAGC GTGATGTTTC CATCATGCCG TTCAAAATTA TTGCTGCTGA TAACGGCGAC
GCATGGGTCG AAGTTAAAGG CCAGAAAATG GCACCGCCGC AGATTTCTGC TGAAGTGCTG
AAAAAAATGA AGAAAACCGC TGAAGATTAC TTGGGTGAAC CGGTAACTGA AGCTGTTATC
ACCGTACCGG CATACTTTAA CGATGCTCAG CGTCAGGCAA CCAAAGACGC AGGCCGTATC
GCTGGTCTGG AAGTAAAACG TATCATCAAC GAACCGACCG CAGCTGCGCT GGCTTACGGT
CTGGACAAAG GTACTGGCAA CCGTACTATC GCGGTTTATG ACCTGGGTGG TGGTACTTTC
GATATTTCTA TTATCGAAAT CGACGAAGTT GACGGCGAAA AAACCTTCGA AGTTCTGGCT
ACCAACGGTG ATACCCACCT GGGTGGTGAA GACTTCGACA GCCGTCTGAT CAACTACCTG
GTTGAAGAAT TCAAGAAAGA TCAGGGCATT GACCTGCGCA ACGATCCGCT GGCAATGCAG
CGCCTGAAAG AAGCGGCAGA AAAAGCGAAA ATCGAACTGT CTTCCGCTCA GCAGACCGAC
GTTAACCTGC CGTACATCAC TGCAGATGCG ACCGGTCCGA AACACATGAA CATCAAAGTG
ACTCGTGCGA AACTGGAAAG CCTGGTTGAA GATCTGGTAA ACCGTTCCAT TGAGCCGCTG
AAAGTTGCAC TGCAGGACGC TGGCCTGTCC GTATCTGATA TCGACGACGT TATCCTCGTT
GGTGGTCAGA CTCGTATGCC AATGGTTCAG AAGAAAGTTG CTGAGTTCTT TGGTAAAGAG
CCGCGTAAAG ACGTTAACCC GGACGAAGCT GTAGCAATCG GTGCTGCTGT TCAGGGTGGT
GTTCTGACTG GTGACGTGAA AGACGTACTG CTGCTGGACG TTACCCCGCT GTCTCTGGGT
ATCGAAACCA TGGGCGGTGT GATGACGACG CTGATCGCGA AAAACACCAC TATCCCGACC
AAGCACAGCC AGGTGTTCTC TACCGCTGAA GACAACCAGT CTGCGGTAAC CATCCATGTG
CTGCAGGGTG AACGTAAACG TGCGGCTGAT AACAAATCTC TGGGTCAGTT CAACCTGGAT
GGTATCAACC CGGCACCGCG CGGCATGCCG CAGATCGAAG TTACCTTCGA TATCGATGCT
GACGGTATCC TGCACGTTTC CGCGAAAGAT AAAAACAGCG GTAAAGAGCA GAAGATCACC
ATCAAGGCGT CTTCTGGTCT GAACGAAGAT GAAATCCAGA AAATGGTACG CGACGCAGAA
GCTAACGCCG AAGCTGACCG TAAGTTTGAA GAGCTGGTAC AGACTCGCAA CCAGGGCGAC
CATCTGCTGC ACAGCACCCG TAAGCAGGTT GAAGAAGCAG GCGACAAACT GCCGGCTGAC
GACAAAACTG CTATCGAGTC TGCACTGACT GCACTGGAAA CTGCTCTGAA AGGTGAAGAC
AAAGCCGCTA TCGAAGCGAA AATGCAGGAG CTGGCACAGG TTTCCCAGAA ACTGATGGAA
ATCGCCCAGC AGCAACATGC CCAGCAGCAG ACTGCCGGTG CTGATGCTTC TGCAAACAAC
GCGAAAGATG ACGATGTTGT CGACGCTGAA TTTGAAGAAG TCAAAGACAA AAAATAA
|
|---|
| Protein sequence | MGKIIGIDLG TTNSCVAIMD GTTPRVLENA EGDRTTPSII AYTQDGETLV GQPAKRQAVT
NPQNTLFAIK RLIGRRFQDE EVQRDVSIMP FKIIAADNGD AWVEVKGQKM APPQISAEVL
KKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG
LDKGTGNRTI AVYDLGGGTF DISIIEIDEV DGEKTFEVLA TNGDTHLGGE DFDSRLINYL
VEEFKKDQGI DLRNDPLAMQ RLKEAAEKAK IELSSAQQTD VNLPYITADA TGPKHMNIKV
TRAKLESLVE DLVNRSIEPL KVALQDAGLS VSDIDDVILV GGQTRMPMVQ KKVAEFFGKE
PRKDVNPDEA VAIGAAVQGG VLTGDVKDVL LLDVTPLSLG IETMGGVMTT LIAKNTTIPT
KHSQVFSTAE DNQSAVTIHV LQGERKRAAD NKSLGQFNLD GINPAPRGMP QIEVTFDIDA
DGILHVSAKD KNSGKEQKIT IKASSGLNED EIQKMVRDAE ANAEADRKFE ELVQTRNQGD
HLLHSTRKQV EEAGDKLPAD DKTAIESALT ALETALKGED KAAIEAKMQE LAQVSQKLME
IAQQQHAQQQ TAGADASANN AKDDDVVDAE FEEVKDKK
|
|---|
| |