Gene EcolC_3637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3637 
SymbolnhaR 
ID6065391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3982681 
End bp3983586 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID641603052 
Producttranscriptional activator NhaR 
Protein accessionYP_001726575 
Protein GI170021621 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT CTCATATCAA TTACAACCAC TTGTATTACT TCTGGCATGT TTATAAAGAA 
GGTTCTGTGG TTGGCGCAGC GGAGGCGCTT TATTTAACAC CACAAACCAT TACCGGACAG
ATTCGGGCGC TGGAAGAGCG CCTGCAAGGC AAATTATTTA AGCGCAAGGG ACGTGGTCTC
GAACCCAGCG AGCTGGGAGA GCTGGTCTAT CGCTATGCCG ATAAAATGTT CACCTTAAGC
CAGGAAATGC TGGATATCGT GAACTATCGC AAAGAATCCA ATTTATTGTT TGACGTTGGC
GTGGCTGATG CACTTTCCAA ACGCCTGGTC AGTAGCGTGC TGAATGCTGC AGTAGTAGAA
GGCGAACCGA TTCATCTTCG CTGCTTCGAA TCCACCCACG AAATGCTGCT GGAGCAATTA
AGCCAGCATA AACTGGATAT GATCATTTCC GACTGTCCGA TAGATTCTAC GCAGCAGGAA
GGCCTGTTCT CCGTGAGAAT TGGCGAATGT GGCGTGAGCT TCTGGTGTAC AAATCCACCA
CCGGAAAAAC CGTTCCCGGC TTGTCTGGAA GACCGGCGGC TTTTGATTCC TGGACGACGT
TCAATGTTAG GGCGTAAATT GCTTAACTGG TTTAACTCCC AGGGATTAAA CGTAGAAATC
CTCGGCGAGT TTGATGATGC CGCGTTGATG AAAGCTTTTG GTGCGATGCA CAATGCAATC
TTCGTTGCCC CAACGCTTTA TGCATATGAC TTTTATGCCG ATAAAACTGT CGTAGAAATT
GGTCGCGTCG AGAATGTGAT GGAAGAGTAT CATGCTATTT TTGCTGAGCG GATGATTCAG
CACCCGGCGG TACAGCGAAT CTGCAATACG GATTATTCTG CGCTTTTTAG TCCAGCAGCA
CGTTAA
 
Protein sequence
MSMSHINYNH LYYFWHVYKE GSVVGAAEAL YLTPQTITGQ IRALEERLQG KLFKRKGRGL 
EPSELGELVY RYADKMFTLS QEMLDIVNYR KESNLLFDVG VADALSKRLV SSVLNAAVVE
GEPIHLRCFE STHEMLLEQL SQHKLDMIIS DCPIDSTQQE GLFSVRIGEC GVSFWCTNPP
PEKPFPACLE DRRLLIPGRR SMLGRKLLNW FNSQGLNVEI LGEFDDAALM KAFGAMHNAI
FVAPTLYAYD FYADKTVVEI GRVENVMEEY HAIFAERMIQ HPAVQRICNT DYSALFSPAA
R