| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3596 |
|---|
| Symbol | araD |
|---|
| ID | 6066010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3933031 |
|---|
| End bp | 3933726 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641603014 |
|---|
| Product | L-ribulose-5-phosphate 4-epimerase |
|---|
| Protein accession | YP_001726537 |
|---|
| Protein GI | 170021583 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000129105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAG ATCTCAAACG CCAGGTATTA GAAGCCAACC TGGCGCTGCC AAAACACAAC
CTGGTCACGC TCACATGGGG CAACGTCAGC GCCGTTGATC GCGAGCGCGG CGTCTTTGTG
ATCAAACCTT CCGGCGTCGA TTACAGCGTC ATGACCGCTG ACGATATGGT CGTGGTTAGC
ATCGAAACCG GTGAAGTGGT TGAAGGTACG AAAAAGCCCT CCTCCGACAC GCCAACTCAC
CGGCTGCTCT ATCAGGCATT CCCCTCCATT GGCGGCATTG TGCATACGCA CTCGCGCCAC
GCCACCATCT GGGCGCAGGC GGGTCAGTCG ATTCCAGCAA CCGGCACCAC CCACGCCGAC
TATTTCTACG GCACCATTCC CTGCACCCGC AAAATGACCG ACGCAGAAAT CAACGGCGAA
TATGAGTGGG AAACCGGTAA CGTCATCGTA GAAACCTTTG AAAAACAGGG TATCGATGCA
GCGCAAATGC CCGGCGTTCT GGTCCATTCC CACGGCCCGT TTGCATGGGG CAAAAATGCC
GAAGATGCGG TGCATAACGC CATCGTGCTG GAAGAGGTCG CTTATATGGG GATATTCTGC
CGTCAGTTAG CGCCGCAGTT ACCGGATATG CAGCAAACGC TGCTGGATAA ACACTATCTG
CGTAAGCATG GCGCGAAGGC ATATTACGGG CAGTAA
|
|---|
| Protein sequence | MLEDLKRQVL EANLALPKHN LVTLTWGNVS AVDRERGVFV IKPSGVDYSV MTADDMVVVS
IETGEVVEGT KKPSSDTPTH RLLYQAFPSI GGIVHTHSRH ATIWAQAGQS IPATGTTHAD
YFYGTIPCTR KMTDAEINGE YEWETGNVIV ETFEKQGIDA AQMPGVLVHS HGPFAWGKNA
EDAVHNAIVL EEVAYMGIFC RQLAPQLPDM QQTLLDKHYL RKHGAKAYYG Q
|
|---|
| |