| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3588 |
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| Symbol | |
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| ID | 6064871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3922282 |
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| End bp | 3923937 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641603006 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_001726529 |
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| Protein GI | 170021575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000489241 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCTG CTCGTCTGCA ACAACAGTTC ATCCGCCTGT GGCAATGCTG CGAGGGTAAA
TCGCAGGACA CAACGCTCAA CGAACTGGCA GCGTTATTGA GCTGCTCGCG TCGTCATATG
CGTACCCTGC TCAACACCAT GCAGGATCGC GGCTGGCTGA CGTGGGAAGC GGAAGTCGGG
CGCGGTAAAC GCTCGCGTCT GACATTCCTC TATACCGGGC TGGCGCTTCA GCAACAGCGG
GCGGAAGACC TGCTGGAGCA GGATCGTATC GACCAACTAG TACAGTTGGT TGGCGACAAA
GCGACTGTGC GGCAAATGCT GGTTTCTCAT CTGGGCCGCA GCTTCCGCCA GGGGCGGCAC
ATCCTGCGCG TGCTCTACTA TCGTCCGTTG CGTAATCTGC TACCTGGCAG CGCATTGCGC
CGTTCCGAAA CCCATATTGC CCGGCAAATC TTCAGTTCGC TAACGCGCAT AAATGAGGAA
AATGGGGAAC TGGAAGCAGA CATCGCCCAC CACTGGCAGC AAATATCACC GCTTCACTGG
CGTTTCTTTT TGCGTCCAGG AGTCCATTTT CATCATGGTC GTGAACTGGA AATGGACGAC
GTGATCGCCT CTTTAAAACG AATCAATACG CTGCCGCTCT ATTCGCATAT TGCTGACATT
GTGTCGCCGA CGCCCTGGAC GCTGGATATC CATCTCACGC AACCGGACCG CTGGTTACCG
TTATTGCTGG GGCAAGTTCC GGCGATGATC CTGCCGCGCG AATGGGAAAC CCTCAGTAAC
TTTGCCAGCC ATCCCATCGG CACCGGTCCG TATGCGGTGA TCCGCAACAG CACCAATCAA
CTGAAAATTC AGGCATTCGA TGACTTCTTC GGTTACCGGG CATTAATCGA CGAAGTTAAC
GTCTGGGTTC TGCCGGAAAT TGCCGACGAG CCAGCCGGAG GTCTGATGCT AAAAGGTCCA
CAGGGCGAGG AAAAAGAGAT TGAAAGCCGC CTGGAGGAAG GTTGCTACTA TTTACTATTC
GACAGCCGCA CCCATCGCGG GGCGAATCAG CAAGTCAGGG ACTGGGTAAG CTATGTGCTT
TCTCCAACTA ATCTGGTCTA TTTCGCTGAG GAACAGTACC AGCAACTGTG GTTCCCGGCT
TATGGACTGC TCCCCCGTTG GCACCATGCC CGCACCATAA AGAGCGAAAA ACCGGCTGGT
CTGGAAAGCC TCACCCTAAC CTTTTATCAG GATCACAGTG AGCATCGGGT GATTGCCGGG
ATCATGCAGC AGATTCTGGC AAGTCACCAG GTCACGCTGG AAATCAAAGA GATCGACTAC
GATCAGTGGC ATACAGGAGA GATCGAAAGT GATATCTGGC TAAACAGCGC CAACTTTACC
CTGCCGCTGG ACTTCTCTGT TTTCGCACAT TTATGCGAAG TGCCACTGCT ACAACATTGC
ATTCCCATTG ACTGGCAAGC CGACGCTGCT CGCTGGCGCA ATGGCGAGAT GAATCTGGCG
AACTGGTGCC AGCAACTGGT CGCCAGCAAA GCGATGGTGC CATTATTGCA CCACTGGCTG
ATCATTCAGG GGCAACGCAG TATGCGCGGC CTGCGCATGA ACACCCTCGG CTGGTTCGAT
TTTAAATCAG CGTGGTTTGC GCCACCGGAT CCATGA
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| Protein sequence | MPSARLQQQF IRLWQCCEGK SQDTTLNELA ALLSCSRRHM RTLLNTMQDR GWLTWEAEVG
RGKRSRLTFL YTGLALQQQR AEDLLEQDRI DQLVQLVGDK ATVRQMLVSH LGRSFRQGRH
ILRVLYYRPL RNLLPGSALR RSETHIARQI FSSLTRINEE NGELEADIAH HWQQISPLHW
RFFLRPGVHF HHGRELEMDD VIASLKRINT LPLYSHIADI VSPTPWTLDI HLTQPDRWLP
LLLGQVPAMI LPREWETLSN FASHPIGTGP YAVIRNSTNQ LKIQAFDDFF GYRALIDEVN
VWVLPEIADE PAGGLMLKGP QGEEKEIESR LEEGCYYLLF DSRTHRGANQ QVRDWVSYVL
SPTNLVYFAE EQYQQLWFPA YGLLPRWHHA RTIKSEKPAG LESLTLTFYQ DHSEHRVIAG
IMQQILASHQ VTLEIKEIDY DQWHTGEIES DIWLNSANFT LPLDFSVFAH LCEVPLLQHC
IPIDWQADAA RWRNGEMNLA NWCQQLVASK AMVPLLHHWL IIQGQRSMRG LRMNTLGWFD
FKSAWFAPPD P
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