Gene EcolC_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3560 
Symbol 
ID6067518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3891364 
End bp3891876 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID641602977 
ProductSecA regulator SecM 
Protein accessionYP_001726501 
Protein GI170021547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000353856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00437684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGGAA TACTGACGCG CTGGCGACAG TTTGGTAAAC GCTACTTCTG GCCGCATCTC 
TTATTAGGGA TGGTTGCGGC GAGTTTAGGT TTGCCTGCGC TCAGCAACGC CGCCGAACCA
AACGCGCCCG CAAAAGCGAC AACCCGCAAC CACGAGCCTT CAGCCAAAGT TAACTTTGGT
CAATTGGCCT TGCTGGAAGC GAACACACGC CGCCCGAATT CGAACTATTC CGTTGATTAC
TGGCATCAAC ATGCCATTCG CACGGTAATC CGTCATCTTT CTTTCGCAAT GGCACCGCAA
ACACTGCCCG TTGCTGAAGA ATCTTTGCCT CTTCAGGCGC AACATCTTGC ATTACTGGAT
ACGCTCAGCG CGCTGCTGAC CCAGGAAGGC ACGCCGTCTG AAAAGGGTTA TCGCATTGAT
TATGCGCATT TTACCCCACA AGCAAAATTC AGCACGCCCG TCTGGATAAG CCAGGCGCAA
GGCATCCGTG CTGGCCCTCA ACGCCTCACC TAA
 
Protein sequence
MSGILTRWRQ FGKRYFWPHL LLGMVAASLG LPALSNAAEP NAPAKATTRN HEPSAKVNFG 
QLALLEANTR RPNSNYSVDY WHQHAIRTVI RHLSFAMAPQ TLPVAEESLP LQAQHLALLD
TLSALLTQEG TPSEKGYRID YAHFTPQAKF STPVWISQAQ GIRAGPQRLT