| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3558 |
|---|
| Symbol | |
|---|
| ID | 6065146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3888148 |
|---|
| End bp | 3888537 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641602975 |
|---|
| Product | nucleoside triphosphate pyrophosphohydrolase |
|---|
| Protein accession | YP_001726499 |
|---|
| Protein GI | 170021545 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.016637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00136766 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TGCAAATTGC GGTAGGTATT ATTCGCAACG AGAACAATGA AATCTTTATA
ACGCGTCGCG CAGCAGATGC GCACATGGCG AATAAACTGG AGTTTCCCGG CGGTAAAATT
GAAATGGGTG AAACGCCGGA ACAGGCGGTG GTGCGTGAAC TTCAGGAAGA AGTCGGGATT
ACCCCCCAAC ATTTTTCGCT ATTTGAAAAA CTGGAATATG AATTCCCGGA CAGGCATATA
ACACTGTGGT TTTGGCTGGT CGAACGCTGG GAAGGGGAGC CGTGGGGTAA AGAAGGGCAA
CCCGGTGAGT GGATGTCGCT GGTCGGTCTT AATGCCGATG ATTTTCCGCC AGCCAATGAA
CCGGTAATTG CGAAGCTTAA ACGTCTGTAG
|
|---|
| Protein sequence | MKKLQIAVGI IRNENNEIFI TRRAADAHMA NKLEFPGGKI EMGETPEQAV VRELQEEVGI
TPQHFSLFEK LEYEFPDRHI TLWFWLVERW EGEPWGKEGQ PGEWMSLVGL NADDFPPANE
PVIAKLKRL
|
|---|
| |