Gene EcolC_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3554 
Symbol 
ID6065967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3885094 
End bp3886137 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content51% 
IMG OID641602971 
Productguanosine 5'-monophosphate oxidoreductase 
Protein accessionYP_001726495 
Protein GI170021541 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01305] guanosine monophosphate reductase, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00169079 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATTG AAGAAGATCT GAAGTTAGGT TTTAAAGACG TTCTTATCCG CCCTAAACGC 
TCCACTCTTA AAAGCCGTTC CGATGTTGAA CTGGAACGTC AATTCACCTT CAAACATTCA
GGTCAGAGCT GGTCCGGCGT GCCGATTATC GCCGCAAATA TGGACACCGT AGGCACATTT
TCTATGGCCT CTGCGCTGGC TTCTTTTGAT ATTTTGACTG CTGTGCATAA ACACTATTCT
GTCGAAGAGT GGCAAGCGTT TATCAACAAT TCTTCCGCTG ATGTGCTGAA ACATGTGATG
GTTTCTACCG GTACGTCTGA TGCGGATTTC GAAAAAACTA AACAGATTCT CGACCTGAAC
CCGGCATTAA ACTTCGTTTG TATTGACGTG GCGAATGGTT ATTCCGAACA CTTCGTGCAG
TTCGTTGCGA AAGCGCGTGA AGCGTGGCCG ACCAAAACCA TTTGTGCTGG TAACGTAGTG
ACTGGTGAAA TGTGTGAGGA GCTTATCCTC TCAGGTGCCG ATATCGTTAA AGTTGGCATT
GGCCCAGGTT CTGTTTGTAC AACTCGCGTC AAAACAGGCG TCGGTTATCC GCAACTTTCT
GCGGTAATCG AATGTGCCGA TGCTGCGCAC GGTCTGGGCG GAATGATCGT CAGCGATGGT
GGCTGCACCA CGCCGGGCGA TGTGGCGAAA GCCTTTGGCG GCGGTGCCGA TTTCGTCATG
CTTGGCGGCA TGCTGGCGGG CCACGAAGAG AGCGGCGGTC GCATCGTTGA GGAGAACGGC
GAGAAATTTA TGCTGTTCTA CGGCATGAGC TCCGAGTCTG CGATGAAACG TCACGTTGGC
GGCGTTGCGG AATATCGCGC AGCAGAAGGT AAAACCGTTA AGCTGCCGCT GCGAGGCCCG
GTTGAAAATA CCGCGCGAGA TATTTTGGGC GGCCTGCGTT CAGCTTGTAC ATACGTTGGG
GCTTCACGCC TGAAAGAGCT GACCAAGCGC ACCACGTTTA TTCGTGTGCA GGAACAAGAA
AACCGCATCT TCAACAACCT GTAA
 
Protein sequence
MRIEEDLKLG FKDVLIRPKR STLKSRSDVE LERQFTFKHS GQSWSGVPII AANMDTVGTF 
SMASALASFD ILTAVHKHYS VEEWQAFINN SSADVLKHVM VSTGTSDADF EKTKQILDLN
PALNFVCIDV ANGYSEHFVQ FVAKAREAWP TKTICAGNVV TGEMCEELIL SGADIVKVGI
GPGSVCTTRV KTGVGYPQLS AVIECADAAH GLGGMIVSDG GCTTPGDVAK AFGGGADFVM
LGGMLAGHEE SGGRIVEENG EKFMLFYGMS SESAMKRHVG GVAEYRAAEG KTVKLPLRGP
VENTARDILG GLRSACTYVG ASRLKELTKR TTFIRVQEQE NRIFNNL