| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3525 |
|---|
| Symbol | panB |
|---|
| ID | 6065475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3849982 |
|---|
| End bp | 3850776 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641602942 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_001726466 |
|---|
| Protein GI | 170021512 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA CCACCATCTC CTTACTGCAG AAGTACAAAC AGGAAAAAAA ACGTTTCGCG
ACCATCACCG CTTATGACTA TAGCTTCGCC AAACTCTTTG CTGATGAAGG ACTTAACGTC
ATGCTGGTAG GCGATTCGCT GGGCATGACG GTTCAGGGAC ACGACTCCAC CCTGCCAGTT
ACCGTTGCCG ATATCGCCTA CCACACTGCC GCCGTACGTC GCGGCGCACC AAACTGCCTG
CTGTTGGCTG ACCTGCCGTT TATGGCGTAT GCCACACCGG AACAAGCCTT TGAAAACGCC
GCAACGGTTA TGCGTGCCGG TGCCAACATG GTCAAAATTG AAGGCGGTGA GTGGCTGGTA
GAAACCGTAC AAATGCTGAC CGAACGTGCC GTTCCTGTAT GTGGTCACTT AGGTTTAACC
CCACAGTCAG TGAATATTTT CGGTGGCTAC AAAGTACAGG GGCGCGGCGA TGAAGCGGGT
GATCAACTGC TCAGCGATGC ATTAGCCTTA GAAGCCGCTG GGGCACAGTT GCTGGTGCTG
GAATGCGTGC CGGTTGAACT GGCAAAACGT ATTACCGAAG CACTGGCGAT CCCGGTTATT
GGCATTGGAG CAGGCAACGT CACTGACGGG CAGATCCTCG TGATGCACGA CGCCTTTGGT
ATTACCGGCG GTCACATTCC TAAATTCGCT AAAAATTTCC TCGCCGAAAC GGGCGACATC
CGCGCGGCTG TGCGGCAGTA TATGGCTGAA GTGGAGTCCG GCGTTTATCC GGGCGAAGAA
CACAGTTTCC ATTAA
|
|---|
| Protein sequence | MKPTTISLLQ KYKQEKKRFA TITAYDYSFA KLFADEGLNV MLVGDSLGMT VQGHDSTLPV
TVADIAYHTA AVRRGAPNCL LLADLPFMAY ATPEQAFENA ATVMRAGANM VKIEGGEWLV
ETVQMLTERA VPVCGHLGLT PQSVNIFGGY KVQGRGDEAG DQLLSDALAL EAAGAQLLVL
ECVPVELAKR ITEALAIPVI GIGAGNVTDG QILVMHDAFG ITGGHIPKFA KNFLAETGDI
RAAVRQYMAE VESGVYPGEE HSFH
|
|---|
| |