Gene EcolC_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3518 
Symbol 
ID6068741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3842889 
End bp3843482 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID641602935 
Productfimbrial protein 
Protein accessionYP_001726459 
Protein GI170021505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00642189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CATTACTCGC CGCCGCACTG GTGATGGTTT CTGGTTCCGC TTTGGCTGTA 
GATGGTGGTC ATATTGATTT TAACGGTCTG GTTCAGTCTG GTACTTGTAA AGTCGGCGTG
GTAGACGCGG GTATGCACGG CATTACTACC GATGGCGTAG TAACACTGGA TACCGCAAAT
GTTACTGATA ACTTTGCGGA AGTTAACGCG ACTGCAGTTG GTTTGTTGCC AAAAGAATTT
ATGATTTCTG TAAATTGTGA ACCTGGTAAG ACAGAAGCCT CTTTAACTAT GGGTTCCGCA
AGCTACGCAA ACACTAGTGG TACTTTGAAT AACAATATGA ACATCACTGT AAATGGCATT
CAGCCAGCAG AGAATGTGAA TATTGCAGTT CATAACATGA CCAACAAATC TGGCGCAGCT
GAGATTAAAC AGGTACACAT GAACAACTCT GCAGAAAAAC ATCTGCTGAC TTTGGATGCT
AATGGCGACG GTCAATATGT GTTTAATGCC TCCTATGTAA AAGCACCGAA CAGCCAGGAT
GTGACTTCTG GTCACGTTAC CACTAACGCA CTGTACACCA TTACTTATAA CTAA
 
Protein sequence
MKKTLLAAAL VMVSGSALAV DGGHIDFNGL VQSGTCKVGV VDAGMHGITT DGVVTLDTAN 
VTDNFAEVNA TAVGLLPKEF MISVNCEPGK TEASLTMGSA SYANTSGTLN NNMNITVNGI
QPAENVNIAV HNMTNKSGAA EIKQVHMNNS AEKHLLTLDA NGDGQYVFNA SYVKAPNSQD
VTSGHVTTNA LYTITYN