Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3518 |
Symbol | |
ID | 6068741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3842889 |
End bp | 3843482 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641602935 |
Product | fimbrial protein |
Protein accession | YP_001726459 |
Protein GI | 170021505 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00642189 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CATTACTCGC CGCCGCACTG GTGATGGTTT CTGGTTCCGC TTTGGCTGTA GATGGTGGTC ATATTGATTT TAACGGTCTG GTTCAGTCTG GTACTTGTAA AGTCGGCGTG GTAGACGCGG GTATGCACGG CATTACTACC GATGGCGTAG TAACACTGGA TACCGCAAAT GTTACTGATA ACTTTGCGGA AGTTAACGCG ACTGCAGTTG GTTTGTTGCC AAAAGAATTT ATGATTTCTG TAAATTGTGA ACCTGGTAAG ACAGAAGCCT CTTTAACTAT GGGTTCCGCA AGCTACGCAA ACACTAGTGG TACTTTGAAT AACAATATGA ACATCACTGT AAATGGCATT CAGCCAGCAG AGAATGTGAA TATTGCAGTT CATAACATGA CCAACAAATC TGGCGCAGCT GAGATTAAAC AGGTACACAT GAACAACTCT GCAGAAAAAC ATCTGCTGAC TTTGGATGCT AATGGCGACG GTCAATATGT GTTTAATGCC TCCTATGTAA AAGCACCGAA CAGCCAGGAT GTGACTTCTG GTCACGTTAC CACTAACGCA CTGTACACCA TTACTTATAA CTAA
|
Protein sequence | MKKTLLAAAL VMVSGSALAV DGGHIDFNGL VQSGTCKVGV VDAGMHGITT DGVVTLDTAN VTDNFAEVNA TAVGLLPKEF MISVNCEPGK TEASLTMGSA SYANTSGTLN NNMNITVNGI QPAENVNIAV HNMTNKSGAA EIKQVHMNNS AEKHLLTLDA NGDGQYVFNA SYVKAPNSQD VTSGHVTTNA LYTITYN
|
| |