Gene EcolC_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3517 
Symbol 
ID6068738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3842061 
End bp3842540 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID641602934 
Product2-amino-4-hydroxy-6- hydroxymethyldihyropteridine pyrophosphokinase 
Protein accessionYP_001726458 
Protein GI170021504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00221389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGG CGTATATTGC CATAGGCAGC AATCTGGCCT CTCCGCTGGA GCAGGTCAAT 
GCTGCCCTGA AAGCATTAGG CGATATCCCT GAAAGCCACA TTCTTACCGT TTCTTCGTTT
TACCGCACCC CACCGCTGGG GCCGCAAGAT CAACCCGATT ACTTAAACGC AGCCGTGGCG
CTGGAAACCT CTCTTGCACC TGAAGAGCTA CTCAATCACA CACAGCGTAT TGAATTGCAG
CAAGGTCGCG TCCGCAAAGC TGAACGCTGG GGACCACGCA CGCTGGATCT CGACATCATG
CTGTTTGGTA ATGAAGTGAT AAATACTGAA CGCCTGACCG TTCCGCACTA CGATATGAAG
AATCGTGGAT TTATGCTGTG GCCGCTGTTT GAGATCGCGC CGGAGTTGGT GTTTCCTGAT
GGGGAGATGT TGCAAAATAG ACTTACTATC CTGAATACTT CACAACCTGT AATCTGGTAA
 
Protein sequence
MTVAYIAIGS NLASPLEQVN AALKALGDIP ESHILTVSSF YRTPPLGPQD QPDYLNAAVA 
LETSLAPEEL LNHTQRIELQ QGRVRKAERW GPRTLDLDIM LFGNEVINTE RLTVPHYDMK
NRGFMLWPLF EIAPELVFPD GEMLQNRLTI LNTSQPVIW