Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3512 |
Symbol | |
ID | 6068642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3837762 |
End bp | 3838292 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641602929 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001726453 |
Protein GI | 170021499 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0807667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC CGCAACGTCT GTTCTTTGCT ATCGACTTAC CTGCAGAAAT CCGCGAACAG ATTATCCACT GGCGCGCCAC ACACTTCCCA CCTGAGGCGG GACGTCCGGT CGCCGCCGAT AATTTGCATC TGACTCTGGC ATTTTTAGGC GACGTGAGCG CCGAGAAAGA GAAGGCGCTT TCTCTTTTAG CCGGACGGAT TCGTCAATCT GGTTTCACAC TCACGCTTGA TGACGCCGGA CAATGGCTGC GTTCGCGTGT GGTGTGGTTA GGGATGCGTC AGCCTCCACG CGGCTTAATC CAGCTGGCGA ATATGCTCCG TTCACAGGCT GCCCGCAGCG GTTGTTTTCA AAGCAATCGT CCGTTTCATC CACATATTAC CTTATTGCGC GACGCCAGCG AGGCGGTGAC AATCCCGCCG CCAGGTTTTA ACTGGTCATA TGCGGTGACG GAGTTCACCC TTTACGCCTC CTCGTTTGCC CGTGGACGCA CACGCTACAC GCCGCTAAAA CGCTGGGCGC TAACGCAATA A
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Protein sequence | MSEPQRLFFA IDLPAEIREQ IIHWRATHFP PEAGRPVAAD NLHLTLAFLG DVSAEKEKAL SLLAGRIRQS GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR PFHPHITLLR DASEAVTIPP PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWALTQ
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