Gene EcolC_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3512 
Symbol 
ID6068642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3837762 
End bp3838292 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID641602929 
Product2'-5' RNA ligase 
Protein accessionYP_001726453 
Protein GI170021499 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0807667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC CGCAACGTCT GTTCTTTGCT ATCGACTTAC CTGCAGAAAT CCGCGAACAG 
ATTATCCACT GGCGCGCCAC ACACTTCCCA CCTGAGGCGG GACGTCCGGT CGCCGCCGAT
AATTTGCATC TGACTCTGGC ATTTTTAGGC GACGTGAGCG CCGAGAAAGA GAAGGCGCTT
TCTCTTTTAG CCGGACGGAT TCGTCAATCT GGTTTCACAC TCACGCTTGA TGACGCCGGA
CAATGGCTGC GTTCGCGTGT GGTGTGGTTA GGGATGCGTC AGCCTCCACG CGGCTTAATC
CAGCTGGCGA ATATGCTCCG TTCACAGGCT GCCCGCAGCG GTTGTTTTCA AAGCAATCGT
CCGTTTCATC CACATATTAC CTTATTGCGC GACGCCAGCG AGGCGGTGAC AATCCCGCCG
CCAGGTTTTA ACTGGTCATA TGCGGTGACG GAGTTCACCC TTTACGCCTC CTCGTTTGCC
CGTGGACGCA CACGCTACAC GCCGCTAAAA CGCTGGGCGC TAACGCAATA A
 
Protein sequence
MSEPQRLFFA IDLPAEIREQ IIHWRATHFP PEAGRPVAAD NLHLTLAFLG DVSAEKEKAL 
SLLAGRIRQS GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR
PFHPHITLLR DASEAVTIPP PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWALTQ