Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3506 |
Symbol | |
ID | 6068583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3826349 |
End bp | 3828331 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641602923 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_001726447 |
Protein GI | 170021493 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000390968 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTAAAC GAATTGCGCT TTTCCCGGCG TTATTGCTGG CGCTGTTGGT GATTGTCGCT ACGGCGCTCA CCTGGATGAA CTTCTCACAG GCGCTGCCGC GCAGTCAGTG GGCGCAGGCC GCCTGGTCGC CGGATATTGA CGTCATCGAG CAGATGATTT TTCACTACAG CTTGTTGCCG CGTCTGGCGA TTTCGCTGCT GGTGGGCGCG GGCCTGGGGC TGGTGGGCGT GCTGTTTCAG CAAGTACTGC GTAACCCGCT GGCGGAACCG ACGACGTTGG GCGTTGCAAC AGGCGCGCAA CTGGGGATTA CCGTCACCAC GCTCTGGGCG CTCCCTGGCG CGATGGCGAG CCAGTTTGCT GCGCTGGCAG GGGCTTGTGT TGTTGGCTTA ATTGTCTTTG GCGTCGCGTG GGGGAAACGG CTGTCGCCGG TAACGCTGAT TCTCGCGGGG TTGGTAGTGA GCCTTTATTG CGGCGCAATC AATCAGTTAC TGGTTATCTT CCATCATGAC CAGTTGCAAA GCATGTTTCT GTGGAGCACT GGAACGCTGA CGCAAACCGA CTGGGGCGGT GTTGAGCGTT TATGGCCGCA GTTGCTGGGC GGTGTGATGC TGACGTTGCT GCTACTTCGT CCGTTAACCC TGATGGGGCT TGATGATGGC GTGGCGCGCA ATCTCGGGCT GGCCTTGTCG CTTGCGCGTC TGGCGGCGCT GTCGCTGGCG ATTGTCATCA GTGCGCTGCT GGTGAACGCT GTGGGGATTA TCGGCTTTAT CGGGTTGTTC GCGCCGCTGC TGGCAAAAAT GCTGGGGGCG CGGCGTCTGC TGCCACGACT GATGCTGGCG TCGTTGATTG GTGCGCTGAT CCTCTGGCTT TCCGATCAAA TCATCCTCTG GCTGACTCGC GTGTGGATGG AAGTGTCCAC CGGTTCGGTC ACTGCGTTGA TCGGTGCGCC GCTGCTACTG TGGCTGTTGC CGCGTTTACG CAGCATTAGC GCGCCGGATA TGAAGGTCAA CGATCGTGTC GCGGCTGAAC GCCAACATGT GCTGGCGTTT GCCCTCGCGG GCGGCGTGCT GCTGTTGATG GCTGTGGTGG TGGCGCTGTC GTTTGGTCGT GATGCGCACG GCTGGACGTG GGCGAGCGGG GCGTTGCTCG AGGATTTAAT GCCCTGGCGC TGGCCGCGAA TTATGGCGGC GCTGTTTGCG GGCGTCATGC TGGCGGTGGC GGGCTGTATT ATTCAGCGAC TGACCGGAAA CCCGATGGCA AGCCCGGAAG TGCTGGGGAT TAGCTCCGGC GCGGCGTTTG GCGTGGTGTT GATGCTGTTT CTGGTGCCGG GTAATGCCTT TGGCTGGCTG TTACCTGCAG GCAGTCTCGG CGCGGCGGTG ACGCTGTTGA TCATTATGAT CGCCGCCGGC CGCGGTGGAT TTTCCCCACA CCGTATGTTA CTGGCGGGGA TGGCGTTAAG CACCGCGTTC ACCATGCTTT TGATGATGTT GCAGGCAAGT GGTGACCCGC GAATGGCGCA AGTGCTGACC TGGATTTCCG GTTCGACCTA CAACGCGACC GATGCGCAGG TCTGGCGCAC CGGAATTGTG ATGGTGATTT TGCTGGCGAT TACCCCGCTG TGCCGCCGCT GGCTGACCAT TTTACCGCTG GGTGGTGATA CCGCCCGAGC CGTAGGAATG GCGCTGACGC CGACGCGAAT TGCGCTGCTG CTGTTAGCGG CTTGCCTGAC GGCGACCGCG ACGATGACTA TTGGACCGTT GAGTTTTGTT GGTTTAATGG CACCGCATAT TGCGCGGATG ATGGGTTTTC GACGGACGAT GCCACACATC GTAATTTCGG CGCTGGTGGG TGGTTTACTG CTGGTGTTCG CTGACTGGTG TGGGCGGATG GTGCTGTTTC CGTTCCAGAT CCCGGCGGGG CTGCTGTCGA CCTTTATCGG CGCGCCATAT TTTATCTATT TGCTGAGAAA GCAGAGCCGT TAA
|
Protein sequence | MSKRIALFPA LLLALLVIVA TALTWMNFSQ ALPRSQWAQA AWSPDIDVIE QMIFHYSLLP RLAISLLVGA GLGLVGVLFQ QVLRNPLAEP TTLGVATGAQ LGITVTTLWA LPGAMASQFA ALAGACVVGL IVFGVAWGKR LSPVTLILAG LVVSLYCGAI NQLLVIFHHD QLQSMFLWST GTLTQTDWGG VERLWPQLLG GVMLTLLLLR PLTLMGLDDG VARNLGLALS LARLAALSLA IVISALLVNA VGIIGFIGLF APLLAKMLGA RRLLPRLMLA SLIGALILWL SDQIILWLTR VWMEVSTGSV TALIGAPLLL WLLPRLRSIS APDMKVNDRV AAERQHVLAF ALAGGVLLLM AVVVALSFGR DAHGWTWASG ALLEDLMPWR WPRIMAALFA GVMLAVAGCI IQRLTGNPMA SPEVLGISSG AAFGVVLMLF LVPGNAFGWL LPAGSLGAAV TLLIIMIAAG RGGFSPHRML LAGMALSTAF TMLLMMLQAS GDPRMAQVLT WISGSTYNAT DAQVWRTGIV MVILLAITPL CRRWLTILPL GGDTARAVGM ALTPTRIALL LLAACLTATA TMTIGPLSFV GLMAPHIARM MGFRRTMPHI VISALVGGLL LVFADWCGRM VLFPFQIPAG LLSTFIGAPY FIYLLRKQSR
|
| |